C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002XA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168913-ENSG00000122756 CGP 9606 9:34521040-34590140
GeneTranscriptPositionBiotype
ENSG00000122756 (CNTFR)
ciliary neurotrophic factor receptor
ENST00000351266 (CNTFR-002) 34551432-34589706 protein_coding
ENST00000378980 (CNTFR-001) 34551432-34589737 protein_coding
ENST00000417345 (CNTFR-003) 34556255-34590123 protein_coding
ENST00000610543 (CNTFR-201) 34551434-34590140 protein_coding
ENSG00000168913 (ENHO)
energy homeostasis associated
ENST00000399775 (ENHO-001) 34521040-34523041 protein_coding
ENSG00000230729 (RP11-296L22.8)
ENST00000439960 (RP11-296L22.8-001) 34521527-34524241 antisense
ENSG00000232983 (RP11-296L22.7)
ENST00000441226 (RP11-296L22.7-001) 34546524-34546996 processed_pseudogene
ENSG00000237159 (CNTFR-AS1)
CNTFR antisense RNA 1
ENST00000436360 (CNTFR-AS1-001) 34568015-34582649 antisense
ENST00000438244 (CNTFR-AS1-003) 34568015-34582829 antisense
ENST00000453642 (CNTFR-AS1-002) 34568015-34582809 antisense
ENST00000454187 (CNTFR-AS1-004) 34569591-34570125 antisense
CIL_0002XA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028445-ENSMUSG00000028444 CGP 10090 4:41638144-41697089
GeneTranscriptPositionBiotype
ENSMUSG00000028444 (Cntfr)
ciliary neurotrophic factor receptor
ENSMUST00000064443 (Cntfr-004) 41669674-41695445 protein_coding
ENSMUST00000084701 (Cntfr-003) 41669674-41697089 protein_coding
ENSMUST00000102961 (Cntfr-001) 41657498-41695442 protein_coding
ENSMUST00000102962 (Cntfr-002) 41657498-41697040 protein_coding
ENSMUST00000145379 (Cntfr-005) 41670982-41695935 protein_coding
ENSMUST00000151181 (Cntfr-006) 41663268-41664034 processed_transcript
ENSMUSG00000028445 (Enho)
energy homeostasis associated
ENSMUST00000127306 (Enho-001) 41638144-41640324 protein_coding
ENSMUSG00000061322 (Dnaic1)
dynein, axonemal, intermediate chain 1
ENSMUST00000102963 (Dnaic1-001) 41569775-41638158 protein_coding
ENSMUST00000119127 (Dnaic1-002) 41633348-41638158 protein_coding
ENSMUST00000143198 (Dnaic1-003) 41631644-41638158 retained_intron
ENSMUSG00000084761 (Gm12406)
predicted gene 12406
ENSMUST00000155382 (Gm12406-001) 41639378-41641416 antisense
ENSMUSG00000087054 (Gm12405)
predicted gene 12405
ENSMUST00000141120 (Gm12405-001) 41642185-41643077 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002XA_0001ENSG00000122756ENST00000351266ENST00000378980ENST00000417345ENST00000610543ENSG00000168913ENST00000399775ENSG00000230729ENST00000439960ENSG00000232983ENST00000441226ENSG00000237159ENST00000436360ENST00000438244ENST00000453642ENST00000454187CIL_0002XA_0002ENSMUSG00000028444ENSMUST00000064443ENSMUST00000084701ENSMUST00000102961ENSMUST00000102962ENSMUST00000145379ENSMUST00000151181ENSMUSG00000028445ENSMUST00000127306ENSMUSG00000061322ENSMUST00000102963ENSMUST00000119127ENSMUST00000143198ENSMUSG00000084761ENSMUST00000155382ENSMUSG00000087054ENSMUST00000141120
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002XA_0001ENSG00000122756ENST00000351266ENST00000378980ENST00000417345ENSG00000168913ENST00000399775ENSG00000230729ENST00000439960ENSG00000232983ENST00000441226ENSG00000237159ENST00000436360ENST00000438244ENST00000453642ENST00000454187CIL_0002XA_0002ENSMUSG00000028444ENSMUST00000064443ENSMUST00000102961ENSMUST00000102962ENSMUST00000145379ENSMUSG00000028445ENSMUST00000127306ENSMUSG00000061322ENSMUST00000102963ENSMUST00000143198ENSMUSG00000084761ENSMUST00000155382ENSMUSG00000087054ENSMUST00000141120
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000122756 ENST00000351266 12.920±0.00 3.005±0.00 0.202±0.00 16.159±0.00 13.586±0.00 1.763±0.87 0.819±0.00 1.213±0.00 0.280±0.00 2.044±0.00 23.816±0.00 1.989±0.00 5.270±1.68 5.132±0.00
ENST00000378980 9.311±0.00 1.467±0.00 N/A 5.076±0.30 3.147±2.72 N/A 0.632±0.26 N/A 1.281±0.01 0.701±0.22 9.174±5.27 5.370±0.00 4.144±3.41 3.595±0.04
ENST00000417345 N/A N/A N/A 8.840±0.00 N/A 1.092±0.00 0.550±0.00 0.351±0.00 N/A N/A N/A N/A 1.199±0.73 N/A
ENST00000610543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168913 ENST00000399775 0.169±0.00 0.120±0.00 N/A 19.888±12.07 0.383±0.00 0.856±0.00 0.117±0.00 0.196±0.00 1.678±0.00 0.333±0.00 0.340±0.29 0.227±0.13 0.309±0.15 4.882±1.15
ENSG00000230729 ENST00000439960 N/A 0.066±0.00 N/A 11.556±0.00 0.210±0.00 0.350±0.00 0.125±0.00 1.114±1.05 0.265±0.00 N/A N/A 0.237±0.01 N/A 2.009±0.15
ENSG00000232983 ENST00000441226 N/A N/A N/A 0.158±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000237159 ENST00000436360 0.019±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.00 N/A
ENST00000438244 0.070±0.00 N/A N/A 0.062±0.00 0.146±0.00 0.297±0.17 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453642 N/A N/A N/A N/A N/A 0.085±0.00 0.022±0.00 N/A 0.596±0.00 N/A N/A N/A N/A N/A
ENST00000454187 N/A N/A N/A N/A N/A N/A 0.159±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028444 ENSMUST00000064443 N/A 15.219±0.00 N/A N/A N/A 0.920±0.23 N/A N/A 0.341±0.04 N/A N/A 4.569±0.90 N/A N/A
ENSMUST00000084701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000102961 0.805±0.08 9.047±4.97 16.702±3.26 11.460±3.63 3.481±1.87 0.786±0.23 1.791±1.14 2.644±1.08 0.537±0.23 3.624±0.66 6.365±2.82 3.926±2.19 0.529±0.50 0.732±0.23
ENSMUST00000102962 N/A 7.318±0.26 N/A N/A N/A 0.587±0.45 N/A N/A 0.423±0.00 N/A N/A 3.178±1.84 0.227±0.16 0.568±0.29
ENSMUST00000145379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.882±0.00
ENSMUST00000151181 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000028445 ENSMUST00000127306 5.636±1.19 5.066±1.50 105.313±13.70 48.021±8.78 21.185±8.40 11.534±1.85 9.571±1.52 4.467±0.51 15.981±15.69 16.754±2.16 12.415±0.97 11.408±3.18 11.658±3.06 N/A
ENSMUSG00000061322 ENSMUST00000102963 N/A N/A N/A N/A 0.784±0.00 N/A N/A N/A N/A 2.526±0.31 N/A 2.890±0.60 0.639±0.15 38.587±1.53
ENSMUST00000119127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143198 N/A N/A 37.792±1.48 N/A 5.705±1.45 5.789±0.58 2.720±1.21 N/A 1.586±0.79 2.979±0.00 N/A N/A N/A N/A
ENSMUSG00000084761 ENSMUST00000155382 0.054±0.01 N/A 32.431±8.46 0.521±0.16 0.306±0.12 0.235±0.06 0.047±0.00 N/A 0.294±0.29 N/A 0.082±0.00 0.300±0.12 0.046±0.03 0.122±0.08
ENSMUSG00000087054 ENSMUST00000141120 N/A N/A 33.009±7.47 0.365±0.17 0.163±0.09 0.202±0.07 0.183±0.00 0.104±0.03 0.232±0.16 N/A N/A 0.187±0.05 0.041±0.02 0.072±0.00

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