C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ciliary neurotrophic factor receptor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028444 Cntfr 10090 - 4:41657498-41697089 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000064443 Cntfr-004 41669674-41695445 protein_coding
  ENSMUST00000084701 Cntfr-003 41669674-41697089 protein_coding
  ENSMUST00000102961 Cntfr-001 41657498-41695442 protein_coding
  ENSMUST00000102962 Cntfr-002 41657498-41697040 protein_coding
  ENSMUST00000145379 Cntfr-005 41670982-41695935 protein_coding
  ENSMUST00000151181 Cntfr-006 41663268-41664034 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000064443ENSMUST00000102961ENSMUST00000102962ENSMUST00000145379
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000064443 N/A 15.219±0.00 N/A N/A N/A 0.920±0.23 N/A N/A 0.341±0.04 N/A N/A 4.569±0.90 N/A N/A
ENSMUST00000102961 0.805±0.08 9.047±4.97 16.702±3.26 11.460±3.63 3.481±1.87 0.786±0.23 1.791±1.14 2.644±1.08 0.537±0.23 3.624±0.66 6.365±2.82 3.926±2.19 0.529±0.50 0.732±0.23
ENSMUST00000102962 N/A 7.318±0.26 N/A N/A N/A 0.587±0.45 N/A N/A 0.423±0.00 N/A N/A 3.178±1.84 0.227±0.16 0.568±0.29
ENSMUST00000145379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.882±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002XA CIL_0002XA_0002 CGP 4:41638144-41697089

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001967 IMP suckling behavior
GO:0003360 IMP brainstem development
GO:0004897 IGI ciliary neurotrophic factor receptor activity
GO:0005102 IEA receptor binding
GO:0005515 IPI protein binding
GO:0005886 IEA plasma membrane
GO:0007548 IMP sex differentiation
GO:0008284 IGI positive regulation of cell proliferation
GO:0019955 IEA cytokine binding
GO:0031225 IEA anchored component of membrane
GO:0043524 IMP negative regulation of neuron apoptotic process
GO:0060538 IMP skeletal muscle organ development
GO:0070120 IGI ciliary neurotrophic factor-mediated signaling pathway
GO:0097059 IEA CNTFR-CLCF1 complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028661 cntfr ciliary neurotrophic factor receptor protein_coding Danio_rerio
ENSG00000122756 CNTFR ciliary neurotrophic factor receptor protein_coding Homo_sapiens

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