C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sarcosine dehydrogenase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000123453 SARDH 9606 - 9:133663560-133739955 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000298628 SARDH-201 133725393-133739955 protein_coding
  ENST00000371867 SARDH-004 133718322-133734043 protein_coding
  ENST00000371868 SARDH-002 133663564-133703701 protein_coding
  ENST00000371872 SARDH-001 133663560-133739920 protein_coding
  ENST00000422262 SARDH-202 133663564-133730163 protein_coding
  ENST00000427237 SARDH-005 133694354-133738355 protein_coding
  ENST00000439388 SARDH-203 133663564-133738357 protein_coding
  ENST00000469828 SARDH-003 133663972-133667123 processed_transcript
  ENST00000616662 SARDH-204 133694355-133738355 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000298628ENST00000371867ENST00000371868ENST00000371872ENST00000422262ENST00000427237ENST00000439388ENST00000469828ENST00000616662
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000298628 N/A N/A N/A N/A N/A N/A 0.091±0.00 N/A N/A N/A 0.066±0.00 0.329±0.00 N/A 0.444±0.32
ENST00000371867 0.151±0.00 N/A 0.846±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371868 N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371872 N/A N/A 1.295±0.00 N/A N/A N/A N/A 12.427±0.00 13.777±0.00 N/A N/A N/A N/A 0.160±0.00
ENST00000422262 0.145±0.00 N/A N/A 0.479±0.26 0.298±0.12 N/A 0.081±0.01 2.311±0.00 34.785±0.00 1.471±0.00 N/A 0.570±0.23 0.611±0.38 3.629±0.00
ENST00000427237 N/A N/A N/A N/A N/A 0.097±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439388 N/A 0.409±0.00 N/A 0.424±0.37 0.356±0.23 0.304±0.00 N/A 1.433±0.00 6.096±0.00 N/A N/A 2.555±2.27 0.224±0.05 0.252±0.22
ENST00000469828 N/A N/A N/A N/A N/A N/A 0.128±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000616662 N/A N/A N/A N/A N/A 0.100±0.00 N/A N/A N/A N/A N/A N/A 0.261±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00014X CIL_00014X_0001 CGP 9:133636360-133739955
CIL_00014Y CIL_00014Y_0001 CGP 9:133663560-133992604

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004047 IEA aminomethyltransferase activity
GO:0005737 IEA cytoplasm
GO:0005739 ISS mitochondrion
GO:0005759 NAS mitochondrial matrix
GO:0006546 IEA glycine catabolic process
GO:0008150 ND biological_process
GO:0008480 TAS sarcosine dehydrogenase activity
GO:0016491 IEA oxidoreductase activity
GO:0032259 IEA methylation
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058102 sardh sarcosine dehydrogenase protein_coding Danio_rerio
ENSMUSG00000009614 Sardh sarcosine dehydrogenase protein_coding Mus_musculus

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