C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sarcosine dehydrogenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371868 SARDH-002 ENSG00000123453 9606 - 9:133663564-133703701 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENST00000371868
Transcript ID Colon
ENST00000371868 0.027±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00014X CIL_00014X_0001 CGP 9:133636360-133739955
CIL_00014Y CIL_00014Y_0001 CGP 9:133663560-133992604

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004047 IEA aminomethyltransferase activity
GO:0005737 IEA cytoplasm
GO:0006546 IEA glycine catabolic process
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000156434 Sardh-006 processed_transcript Mus_musculus 0 294
ENSMUST00000142136 Sardh-010 retained_intron Mus_musculus 0 294
ENSMUST00000102886 Sardh-001 protein_coding Mus_musculus 0 294
ENSMUST00000091224 Sardh-002 processed_transcript Mus_musculus 0 294

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