C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00014X_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000123454-ENSG00000123453 CGP 9606 9:133636360-133739955
GeneTranscriptPositionBiotype
ENSG00000123453 (SARDH)
sarcosine dehydrogenase 		ENST00000298628 (SARDH-201) 133725393-133739955 protein_coding
ENST00000371867 (SARDH-004) 133718322-133734043 protein_coding
ENST00000371868 (SARDH-002) 133663564-133703701 protein_coding
ENST00000371872 (SARDH-001) 133663560-133739920 protein_coding
ENST00000422262 (SARDH-202) 133663564-133730163 protein_coding
ENST00000427237 (SARDH-005) 133694354-133738355 protein_coding
ENST00000439388 (SARDH-203) 133663564-133738357 protein_coding
ENST00000469828 (SARDH-003) 133663972-133667123 processed_transcript
ENST00000616662 (SARDH-204) 133694355-133738355 protein_coding
ENSG00000225756 (DBH-AS1)
DBH antisense RNA 1 		ENST00000425189 (DBH-AS1-001) 133654586-133657313 antisense
CIL_00014X_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000000889-ENSMUSG00000009614 CGP 10090 2:27165233-27248337
GeneTranscriptPositionBiotype
ENSMUSG00000000889 (Dbh)
dopamine beta hydroxylase 		ENSMUST00000000910 (Dbh-001) 27165233-27183200 protein_coding
ENSMUST00000155290 (Dbh-002) 27177093-27177372 processed_transcript
ENSMUSG00000009614 (Sardh)
sarcosine dehydrogenase 		ENSMUST00000091224 (Sardh-002) 27188393-27232697 processed_transcript
ENSMUST00000102886 (Sardh-001) 27188393-27247266 protein_coding
ENSMUST00000127805 (Sardh-009) 27196708-27218984 retained_intron
ENSMUST00000129975 (Sardh-004) 27244286-27247414 protein_coding
ENSMUST00000139312 (Sardh-003) 27241487-27248337 protein_coding
ENSMUST00000142136 (Sardh-010) 27189197-27192260 retained_intron
ENSMUST00000144448 (Sardh-008) 27211092-27225192 retained_intron
ENSMUST00000147089 (Sardh-007) 27211056-27215632 processed_transcript
ENSMUST00000149733 (Sardh-005) 27241469-27246848 protein_coding
ENSMUST00000156434 (Sardh-006) 27189382-27209937 processed_transcript
ENSMUSG00000091192 (Sardhos)
sarcosine dehydrogenase, opposite strand 		ENSMUST00000170435 (Sardhos-001) 27189382-27234710 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00014X_0001ENSG00000123453ENST00000298628ENST00000371867ENST00000371868ENST00000371872ENST00000422262ENST00000427237ENST00000439388ENST00000469828ENST00000616662ENSG00000225756ENST00000425189CIL_00014X_0002ENSMUSG00000000889ENSMUST00000000910ENSMUST00000155290ENSMUSG00000009614ENSMUST00000091224ENSMUST00000102886ENSMUST00000127805ENSMUST00000129975ENSMUST00000139312ENSMUST00000142136ENSMUST00000144448ENSMUST00000147089ENSMUST00000149733ENSMUST00000156434ENSMUSG00000091192ENSMUST00000170435
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00014X_0001ENSG00000123453ENST00000298628ENST00000371867ENST00000371868ENST00000371872ENST00000422262ENST00000427237ENST00000439388ENST00000469828ENST00000616662ENSG00000225756ENST00000425189CIL_00014X_0002ENSMUSG00000000889ENSMUST00000000910ENSMUSG00000009614ENSMUST00000091224ENSMUST00000102886ENSMUST00000127805ENSMUST00000149733ENSMUST00000156434ENSMUSG00000091192ENSMUST00000170435
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000123453 ENST00000298628 N/A N/A N/A N/A N/A N/A 0.091±0.00 N/A N/A N/A 0.066±0.00 0.329±0.00 N/A 0.444±0.32
ENST00000371867 0.151±0.00 N/A 0.846±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371868 N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371872 N/A N/A 1.295±0.00 N/A N/A N/A N/A 12.427±0.00 13.777±0.00 N/A N/A N/A N/A 0.160±0.00
ENST00000422262 0.145±0.00 N/A N/A 0.479±0.26 0.298±0.12 N/A 0.081±0.01 2.311±0.00 34.785±0.00 1.471±0.00 N/A 0.570±0.23 0.611±0.38 3.629±0.00
ENST00000427237 N/A N/A N/A N/A N/A 0.097±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439388 N/A 0.409±0.00 N/A 0.424±0.37 0.356±0.23 0.304±0.00 N/A 1.433±0.00 6.096±0.00 N/A N/A 2.555±2.27 0.224±0.05 0.252±0.22
ENST00000469828 N/A N/A N/A N/A N/A N/A 0.128±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000616662 N/A N/A N/A N/A N/A 0.100±0.00 N/A N/A N/A N/A N/A N/A 0.261±0.00 N/A
ENSG00000225756 ENST00000425189 0.011±0.00 2.463±0.00 N/A 0.249±0.18 0.054±0.00 0.024±0.00 0.093±0.00 1.457±0.00 11.487±0.00 0.327±0.09 N/A 0.738±0.67 0.306±0.00 2.172±1.16
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000889 ENSMUST00000000910 N/A 133.161±9.74 0.106±0.08 0.389±0.33 0.038±0.02 2.749±0.63 0.532±0.00 2.252±1.18 0.010±0.01 0.077±0.03 N/A 0.180±0.09 0.003±0.00 0.052±0.03
ENSMUST00000155290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000009614 ENSMUST00000091224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.086±0.00 N/A N/A N/A
ENSMUST00000102886 6.222±0.65 1.859±0.37 1.239±0.41 0.896±0.68 3.447±1.71 1.610±0.87 0.729±0.20 44.736±16.52 58.013±55.00 2.291±0.53 0.173±0.08 6.799±2.24 1.018±0.60 0.208±0.05
ENSMUST00000127805 N/A 3.397±0.14 N/A N/A 7.555±1.02 2.477±0.49 3.243±0.00 N/A N/A N/A 0.166±0.00 14.697±0.00 1.149±0.35 0.599±0.06
ENSMUST00000129975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147089 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.867±0.00 1.702±0.00
ENSMUST00000156434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.194±0.00 20.032±0.00 2.255±0.35 N/A
ENSMUSG00000091192 ENSMUST00000170435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.408±0.00 N/A N/A N/A

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