C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00014Y_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000123453-ENSG00000160293 CGP 9606 9:133663560-133992604
GeneTranscriptPositionBiotype
ENSG00000123453 (SARDH)
sarcosine dehydrogenase 		ENST00000298628 (SARDH-201) 133725393-133739955 protein_coding
ENST00000371867 (SARDH-004) 133718322-133734043 protein_coding
ENST00000371868 (SARDH-002) 133663564-133703701 protein_coding
ENST00000371872 (SARDH-001) 133663560-133739920 protein_coding
ENST00000422262 (SARDH-202) 133663564-133730163 protein_coding
ENST00000427237 (SARDH-005) 133694354-133738355 protein_coding
ENST00000439388 (SARDH-203) 133663564-133738357 protein_coding
ENST00000469828 (SARDH-003) 133663972-133667123 processed_transcript
ENST00000616662 (SARDH-204) 133694355-133738355 protein_coding
ENSG00000160293 (VAV2)
vav 2 guanine nucleotide exchange factor 		ENST00000371850 (VAV2-001) 133761894-133992310 protein_coding
ENST00000371851 (VAV2-002) 133761894-133992604 protein_coding
ENST00000406606 (VAV2-003) 133761894-133992281 protein_coding
ENST00000472905 (VAV2-005) 133925851-133939301 processed_transcript
ENST00000486113 (VAV2-004) 133861212-133992259 processed_transcript
CIL_00014Y_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000009614-ENSMUSG00000009621 CGP 10090 2:27188393-27427033
GeneTranscriptPositionBiotype
ENSMUSG00000009614 (Sardh)
sarcosine dehydrogenase 		ENSMUST00000091224 (Sardh-002) 27188393-27232697 processed_transcript
ENSMUST00000102886 (Sardh-001) 27188393-27247266 protein_coding
ENSMUST00000127805 (Sardh-009) 27196708-27218984 retained_intron
ENSMUST00000129975 (Sardh-004) 27244286-27247414 protein_coding
ENSMUST00000139312 (Sardh-003) 27241487-27248337 protein_coding
ENSMUST00000142136 (Sardh-010) 27189197-27192260 retained_intron
ENSMUST00000144448 (Sardh-008) 27211092-27225192 retained_intron
ENSMUST00000147089 (Sardh-007) 27211056-27215632 processed_transcript
ENSMUST00000149733 (Sardh-005) 27241469-27246848 protein_coding
ENSMUST00000156434 (Sardh-006) 27189382-27209937 processed_transcript
ENSMUSG00000009621 (Vav2)
vav 2 oncogene 		ENSMUST00000056176 (Vav2-001) 27262104-27427033 protein_coding
ENSMUST00000132642 (Vav2-003) 27302025-27344480 processed_transcript
ENSMUST00000135584 (Vav2-006) 27269581-27271875 processed_transcript
ENSMUST00000146843 (Vav2-007) 27269581-27271798 processed_transcript
ENSMUST00000148067 (Vav2-004) 27268919-27278879 processed_transcript
ENSMUST00000149758 (Vav2-005) 27268455-27277341 processed_transcript
ENSMUST00000185188 (Vav2-002) 27262104-27426912 nonsense_mediated_decay
ENSMUSG00000086669 (AA645442)
expressed sequence AA645442 		ENSMUST00000156020 (AA645442-001) 27326704-27331297 antisense
ENSMUSG00000091192 (Sardhos)
sarcosine dehydrogenase, opposite strand 		ENSMUST00000170435 (Sardhos-001) 27189382-27234710 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00014Y_0001ENSG00000123453ENST00000298628ENST00000371867ENST00000371868ENST00000371872ENST00000422262ENST00000427237ENST00000439388ENST00000469828ENST00000616662ENSG00000160293ENST00000371850ENST00000371851ENST00000406606ENST00000472905ENST00000486113CIL_00014Y_0002ENSMUSG00000009614ENSMUST00000091224ENSMUST00000102886ENSMUST00000127805ENSMUST00000129975ENSMUST00000139312ENSMUST00000142136ENSMUST00000144448ENSMUST00000147089ENSMUST00000149733ENSMUST00000156434ENSMUSG00000009621ENSMUST00000056176ENSMUST00000132642ENSMUST00000135584ENSMUST00000146843ENSMUST00000148067ENSMUST00000149758ENSMUST00000185188ENSMUSG00000086669ENSMUST00000156020ENSMUSG00000091192ENSMUST00000170435
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00014Y_0001ENSG00000123453ENST00000298628ENST00000371867ENST00000371868ENST00000371872ENST00000422262ENST00000427237ENST00000439388ENST00000469828ENST00000616662ENSG00000160293ENST00000371850ENST00000371851ENST00000406606ENST00000486113CIL_00014Y_0002ENSMUSG00000009614ENSMUST00000091224ENSMUST00000102886ENSMUST00000127805ENSMUST00000149733ENSMUST00000156434ENSMUSG00000009621ENSMUST00000056176ENSMUST00000185188ENSMUSG00000086669ENSMUST00000156020ENSMUSG00000091192ENSMUST00000170435
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000123453 ENST00000298628 N/A N/A N/A N/A N/A N/A 0.091±0.00 N/A N/A N/A 0.066±0.00 0.329±0.00 N/A 0.444±0.32
ENST00000371867 0.151±0.00 N/A 0.846±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371868 N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371872 N/A N/A 1.295±0.00 N/A N/A N/A N/A 12.427±0.00 13.777±0.00 N/A N/A N/A N/A 0.160±0.00
ENST00000422262 0.145±0.00 N/A N/A 0.479±0.26 0.298±0.12 N/A 0.081±0.01 2.311±0.00 34.785±0.00 1.471±0.00 N/A 0.570±0.23 0.611±0.38 3.629±0.00
ENST00000427237 N/A N/A N/A N/A N/A 0.097±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439388 N/A 0.409±0.00 N/A 0.424±0.37 0.356±0.23 0.304±0.00 N/A 1.433±0.00 6.096±0.00 N/A N/A 2.555±2.27 0.224±0.05 0.252±0.22
ENST00000469828 N/A N/A N/A N/A N/A N/A 0.128±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000616662 N/A N/A N/A N/A N/A 0.100±0.00 N/A N/A N/A N/A N/A N/A 0.261±0.00 N/A
ENSG00000160293 ENST00000371850 N/A N/A N/A 0.479±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371851 0.562±0.00 N/A N/A 0.406±0.00 0.548±0.00 N/A 1.195±0.00 3.418±0.00 0.678±0.42 1.664±1.34 N/A 1.155±0.00 N/A 0.875±0.01
ENST00000406606 2.249±0.00 7.974±0.00 2.760±0.00 1.379±0.70 1.413±0.60 2.874±1.39 0.139±0.01 6.561±2.29 4.636±3.89 3.356±2.20 0.234±0.02 8.208±6.38 7.312±0.49 5.083±1.62
ENST00000472905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486113 N/A N/A N/A N/A 2.577±0.00 N/A 0.883±0.00 N/A 4.051±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000009614 ENSMUST00000091224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.086±0.00 N/A N/A N/A
ENSMUST00000102886 6.222±0.65 1.859±0.37 1.239±0.41 0.896±0.68 3.447±1.71 1.610±0.87 0.729±0.20 44.736±16.52 58.013±55.00 2.291±0.53 0.173±0.08 6.799±2.24 1.018±0.60 0.208±0.05
ENSMUST00000127805 N/A 3.397±0.14 N/A N/A 7.555±1.02 2.477±0.49 3.243±0.00 N/A N/A N/A 0.166±0.00 14.697±0.00 1.149±0.35 0.599±0.06
ENSMUST00000129975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147089 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.867±0.00 1.702±0.00
ENSMUST00000156434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.194±0.00 20.032±0.00 2.255±0.35 N/A
ENSMUSG00000009621 ENSMUST00000056176 4.588±1.31 15.620±4.03 6.886±0.91 12.688±0.00 7.943±4.13 4.383±1.56 4.433±0.42 8.478±3.70 3.875±2.03 11.759±4.04 0.479±0.11 8.669±4.63 8.760±6.19 6.375±4.39
ENSMUST00000132642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185188 N/A N/A N/A 6.811±1.24 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086669 ENSMUST00000156020 N/A N/A N/A N/A N/A N/A N/A N/A 0.232±0.08 N/A N/A 1.015±0.87 1.406±0.06 N/A
ENSMUSG00000091192 ENSMUST00000170435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.408±0.00 N/A N/A N/A

Loading