C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sarcosine dehydrogenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000422262 SARDH-202 ENSG00000123453 9606 - 9:133663564-133730163 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000422262
Transcript ID Adipose Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000422262 0.145±0.00 0.479±0.26 0.298±0.12 0.081±0.01 2.311±0.00 34.785±0.00 1.471±0.00 0.570±0.23 0.611±0.38 3.629±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00014X CIL_00014X_0001 CGP 9:133636360-133739955
CIL_00014Y CIL_00014Y_0001 CGP 9:133663560-133992604

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016491 IEA oxidoreductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102886 Sardh-001 protein_coding Mus_musculus 0 2228
ENSMUST00000091224 Sardh-002 processed_transcript Mus_musculus 0 850
ENSMUST00000156434 Sardh-006 processed_transcript Mus_musculus 0 601
ENSMUST00000142136 Sardh-010 retained_intron Mus_musculus 0 289

Loading