C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: recombination signal binding protein for immunoglobulin kappa J region-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000124232 RBPJL 9606 + 20:45306851-45317824 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000343694 RBPJL-002 45306851-45317822 protein_coding
  ENST00000372741 RBPJL-003 45306851-45316959 protein_coding
  ENST00000372743 RBPJL-001 45306851-45316959 protein_coding
  ENST00000464504 RBPJL-004 45314035-45316959 protein_coding
  ENST00000622729 RBPJL-005 45315925-45317824 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryTestisENST00000622729
Transcript ID Brain Ovary Testis
ENST00000622729 0.035±0.00 0.069±0.00 0.244±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003V4 CIL_0003V4_0001 CGP 20:45252239-45308529
CIL_0003L4 CIL_0003L4_0001 CGP 20:45293445-45317824
CIL_0003L5 CIL_0003L5_0001 CGP 20:45306851-45348424

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000982 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity
GO:0003677 IEA DNA binding
GO:0003700 TAS:IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0007165 TAS signal transduction
GO:0045893 IEA positive regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074148 rbpjl recombination signal binding protein for immunoglobulin kappa J region-like protein_coding Danio_rerio
ENSMUSG00000017007 Rbpjl recombination signal binding protein for immunoglobulin kappa J region-like protein_coding Mus_musculus

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