C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 10, member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000126903 SLC10A3 9606 - X:154487306-154490690 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263512 SLC10A3-201 154487306-154490690 protein_coding
  ENST00000369649 SLC10A3-001 154487306-154490614 protein_coding
  ENST00000393586 SLC10A3-004 154487311-154490628 protein_coding
  ENST00000393587 SLC10A3-002 154487343-154490663 protein_coding
  ENST00000453912 SLC10A3-003 154488287-154490677 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263512ENST00000369649ENST00000393586ENST00000393587ENST00000453912
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263512 8.153±0.00 3.369±0.00 1.100±0.00 2.221±0.00 10.298±0.00 3.789±3.57 2.537±2.09 6.235±5.55 0.953±0.00 8.152±6.22 5.459±3.21 11.023±11.61 18.765±3.44 12.562±0.00
ENST00000369649 2.471±0.00 2.992±0.00 N/A 0.897±0.00 0.927±0.00 N/A 0.884±0.67 1.517±0.00 1.218±0.00 2.368±1.64 3.360±0.00 6.858±0.00 6.991±0.50 1.223±0.00
ENST00000393586 N/A N/A N/A N/A N/A N/A 0.462±0.00 N/A N/A N/A N/A 4.042±0.00 N/A 0.915±0.00
ENST00000393587 6.692±0.00 7.131±0.00 0.945±0.00 N/A N/A 2.723±1.00 0.143±0.00 N/A N/A N/A N/A 10.052±2.05 12.638±6.26 0.890±0.00
ENST00000453912 N/A N/A N/A 0.560±0.33 2.730±0.00 N/A N/A 0.280±0.00 N/A N/A N/A N/A N/A 1.567±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LF CIL_0003LF_0001 CGP X:154483717-154490690
CIL_0003LG CIL_0003LG_0001 CGP X:154487306-154516242

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006814 IEA sodium ion transport
GO:0008508 IEA bile acid:sodium symporter activity
GO:0010033 IEA response to organic substance
GO:0015721 IEA bile acid and bile salt transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0032526 IEA response to retinoic acid
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000095660 slc10a3 solute carrier family 10 (sodium/bile acid cotransporter family), member 3 protein_coding Danio_rerio
ENSMUSG00000032806 Slc10a3 solute carrier family 10 (sodium/bile acid cotransporter family), member 3 protein_coding Mus_musculus

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