C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 10 (sodium/bile acid cotransporter family), member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032806 Slc10a3 10090 - X:74369217-74373349 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000037967 Slc10a3-001 74369217-74373349 protein_coding
  ENSMUST00000073067 Slc10a3-002 74369217-74373305 protein_coding
  ENSMUST00000114146 Slc10a3-003 74369217-74373246 protein_coding
  ENSMUST00000114147 Slc10a3-004 74369217-74371011 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000037967ENSMUST00000073067ENSMUST00000114146ENSMUST00000114147
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000037967 5.341±0.94 7.587±0.66 5.934±1.24 N/A N/A 4.972±0.00 3.416±0.00 N/A N/A 3.991±0.00 1.814±0.55
ENSMUST00000073067 7.150±0.46 N/A N/A 7.766±3.71 7.952±0.68 6.935±1.05 4.917±0.31 4.694±0.00 N/A 5.407±0.60 2.020±0.45
ENSMUST00000114146 6.603±0.91 14.300±4.23 N/A 8.429±3.36 10.509±3.69 5.438±0.00 3.932±0.66 10.414±1.72 19.649±4.82 5.262±0.00 0.164±0.00
ENSMUST00000114147 N/A N/A N/A 8.524±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KI CIL_0006KI_0002 CGP X:74351276-74373218
CIL_0003LF CIL_0003LF_0002 CGP X:74365718-74373349
CIL_0003LG CIL_0003LG_0002 CGP X:74369217-74393272

Gene Ontology
GO IDEvidence TypeGO Description
GO:0006814 IEA sodium ion transport
GO:0008508 IEA bile acid:sodium symporter activity
GO:0010033 IDA response to organic substance
GO:0015721 IEA bile acid and bile salt transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0032526 IDA response to retinoic acid
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000095660 slc10a3 solute carrier family 10 (sodium/bile acid cotransporter family), member 3 protein_coding Danio_rerio
ENSG00000126903 SLC10A3 solute carrier family 10, member 3 protein_coding Homo_sapiens

Loading