C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 10, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393587 SLC10A3-002 ENSG00000126903 9606 - X:154487343-154490663 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderColonHeartOvaryPlacentaTestisENST00000393587
Transcript ID Adipose Adrenal Bladder Colon Heart Ovary Placenta Testis
ENST00000393587 6.692±0.00 7.131±0.00 0.945±0.00 2.723±1.00 0.143±0.00 10.052±2.05 12.638±6.26 0.890±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LF CIL_0003LF_0001 CGP X:154483717-154490690
CIL_0003LG CIL_0003LG_0001 CGP X:154487306-154516242

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006814 IEA sodium ion transport
GO:0008508 IEA bile acid:sodium symporter activity
GO:0015721 IEA bile acid and bile salt transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037967 Slc10a3-001 protein_coding Mus_musculus 0 1354
ENSMUST00000073067 Slc10a3-002 protein_coding Mus_musculus 0 1354
ENSMUST00000114146 Slc10a3-003 protein_coding Mus_musculus 0 1354
ENSMUST00000114147 Slc10a3-004 protein_coding Mus_musculus 0 1057

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