C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CAS1 domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000127995 CASD1 9606 + 7:94509219-94557019 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000297273 CASD1-001 94509798-94557019 protein_coding
  ENST00000417387 CASD1-006 94510071-94528250 nonsense_mediated_decay
  ENST00000443644 CASD1-005 94510068-94535522 nonsense_mediated_decay
  ENST00000447923 CASD1-004 94509219-94533758 protein_coding
  ENST00000471944 CASD1-002 94551733-94556966 retained_intron
  ENST00000489196 CASD1-003 94553852-94556966 retained_intron
  ENST00000618861 CASD1-201 94509858-94557014 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000297273ENST00000471944ENST00000489196ENST00000618861
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000297273 2.951±0.00 3.163±0.00 N/A 4.862±0.77 2.971±0.90 5.559±0.28 5.106±0.00 1.502±0.00 2.359±1.05 1.683±0.16 1.822±0.00 3.296±1.77 1.601±1.17 5.547±0.93
ENST00000471944 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.491±0.00 N/A 1.295±0.00 N/A N/A
ENST00000489196 N/A N/A 0.819±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.124±0.00
ENST00000618861 N/A N/A N/A 4.222±0.00 N/A N/A 0.924±0.00 N/A N/A N/A N/A N/A 0.710±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00082O CIL_00082O_0001 VISTA 7:94046650-94649568
CIL_0007XR CIL_0007XR_0001 VISTA 7:94067785-94669696
CIL_00095G CIL_00095G_0001 VISTA 7:94074791-94676705
CIL_0008ZR CIL_0008ZR_0001 VISTA 7:94144032-94745602
CIL_0004SO CIL_0004SO_0002 CGP 7:94394561-94557019
CIL_0004SP CIL_0004SP_0002 CGP 7:94509219-94656209

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000023900 casd1 CAS1 domain containing 1 protein_coding Danio_rerio
ENSMUSG00000015189 Casd1 CAS1 domain containing 1 protein_coding Mus_musculus

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