C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CAS1 domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000297273 CASD1-001 ENSG00000127995 9606 + 7:94509798-94557019 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000297273
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000297273 2.951±0.00 3.163±0.00 4.862±0.77 2.971±0.90 5.559±0.28 5.106±0.00 1.502±0.00 2.359±1.05 1.683±0.16 1.822±0.00 3.296±1.77 1.601±1.17 5.547±0.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00082O CIL_00082O_0001 VISTA 7:94046650-94649568
CIL_0007XR CIL_0007XR_0001 VISTA 7:94067785-94669696
CIL_00095G CIL_00095G_0001 VISTA 7:94074791-94676705
CIL_0008ZR CIL_0008ZR_0001 VISTA 7:94144032-94745602
CIL_0004SO CIL_0004SO_0002 CGP 7:94394561-94557019
CIL_0004SP CIL_0004SP_0002 CGP 7:94509219-94656209

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015333 Casd1-001 protein_coding Mus_musculus 0 3459
ENSMUST00000181734 Casd1-004 protein_coding Mus_musculus 0 1020
ENSMUST00000141359 Casd1-003 protein_coding Mus_musculus 0 497
ENSMUST00000153963 Casd1-002 processed_transcript Mus_musculus 0 309

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