C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: apolipoprotein L, 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000128335 APOL2 9606 - 22:36226203-36239954 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000249066 APOL2-001 36226210-36239954 protein_coding
  ENST00000358502 APOL2-002 36226203-36239643 protein_coding
  ENST00000451256 APOL2-008 36227342-36239527 protein_coding
  ENST00000454728 APOL2-006 36228195-36239561 protein_coding
  ENST00000473549 APOL2-003 36236933-36239673 processed_transcript
  ENST00000476579 APOL2-007 36236885-36239239 processed_transcript
  ENST00000484830 APOL2-005 36236964-36239570 processed_transcript
  ENST00000489186 APOL2-004 36236927-36239582 processed_transcript
  ENST00000529194 APOL2-009 36228032-36239227 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000249066ENST00000358502ENST00000451256ENST00000529194
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000249066 N/A N/A N/A 0.924±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.457±0.00
ENST00000358502 10.733±0.00 8.009±0.00 0.543±0.00 15.526±11.27 6.827±5.12 2.115±1.42 2.592±1.26 5.847±2.52 2.121±0.02 N/A 2.985±0.00 7.906±5.70 7.646±5.93 6.420±2.41
ENST00000451256 N/A N/A 0.974±0.00 N/A N/A 0.755±0.00 4.288±3.73 1.784±0.00 4.276±0.00 10.976±8.76 3.406±0.00 1.808±0.00 N/A N/A
ENST00000529194 N/A N/A 2.136±0.00 N/A N/A N/A 0.949±0.00 N/A N/A N/A N/A 1.465±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GS CIL_0003GS_0001 CGP 22:36189124-36239954
CIL_0003GS CIL_0003GS_0003 CGP 22:36226203-36267530

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005102 NAS receptor binding
GO:0005576 IEA extracellular region
GO:0005789 NAS endoplasmic reticulum membrane
GO:0006629 NAS lipid metabolic process
GO:0006869 IEA:NAS lipid transport
GO:0006953 NAS acute-phase response
GO:0007275 NAS multicellular organismal development
GO:0008035 NAS high-density lipoprotein particle binding
GO:0008203 NAS cholesterol metabolic process
GO:0008289 IEA:NAS lipid binding
GO:0016020 IDA membrane
GO:0042157 IEA lipoprotein metabolic process
GO:0060135 NAS maternal process involved in female pregnancy

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000073718 APOL4 apolipoprotein L, 4 protein_coding Danio_rerio
ENSMUSG00000010601 Apol7a apolipoprotein L 7a protein_coding Mus_musculus
ENSMUSG00000044309 Apol7c apolipoprotein L 7c protein_coding Mus_musculus
ENSMUSG00000050014 Apol10b apolipoprotein L 10B protein_coding Mus_musculus
ENSMUSG00000050982 Apol10a apolipoprotein L 10A protein_coding Mus_musculus
ENSMUSG00000056656 Apol8 apolipoprotein L 8 protein_coding Mus_musculus
ENSMUSG00000057346 Apol9a apolipoprotein L 9a protein_coding Mus_musculus
ENSMUSG00000068246 Apol9b apolipoprotein L 9b protein_coding Mus_musculus
ENSMUSG00000068252 Apol7b apolipoprotein L 7b protein_coding Mus_musculus
ENSMUSG00000071716 Apol7e apolipoprotein L 7e protein_coding Mus_musculus
ENSMUSG00000091650 Apol11a apolipoprotein L 11a protein_coding Mus_musculus
ENSMUSG00000091694 Apol11b apolipoprotein L 11b protein_coding Mus_musculus

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