C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calumenin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000128595 CALU 9606 + 7:128739292-128771807 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000249364 CALU-001 128739342-128771474 protein_coding
  ENST00000449187 CALU-002 128739363-128770576 protein_coding
  ENST00000479257 CALU-003 128739404-128769936 protein_coding
  ENST00000493278 CALU-004 128758962-128771807 protein_coding
  ENST00000535011 CALU-006 128739292-128771477 protein_coding
  ENST00000542996 CALU-005 128739292-128771477 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000249364ENST00000449187ENST00000479257ENST00000493278ENST00000535011
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000249364 36.229±0.00 26.100±0.00 3.081±0.00 7.440±2.82 23.397±6.95 25.954±17.29 38.595±28.24 14.219±10.78 18.427±3.45 22.107±13.26 9.480±6.39 31.810±9.86 64.336±22.62 19.017±16.23
ENST00000449187 13.500±0.00 8.295±0.00 0.834±0.00 4.408±0.00 7.887±0.53 5.918±2.33 4.549±0.00 6.576±0.00 9.032±5.30 5.346±1.56 4.357±0.00 12.121±6.22 43.870±0.00 7.627±1.06
ENST00000479257 N/A N/A N/A N/A 5.837±0.00 N/A N/A N/A N/A 2.711±0.00 N/A N/A N/A N/A
ENST00000493278 N/A N/A 3.756±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535011 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.395±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004FD CIL_0004FD_0001 CGP 7:128709061-128771807
CIL_0005UE CIL_0005UE_0002 CGP 7:128739292-128775790

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002576 TAS platelet degranulation
GO:0005509 IDA:IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005576 IEA extracellular region
GO:0005783 IDA endoplasmic reticulum
GO:0005794 TAS Golgi apparatus
GO:0007596 TAS blood coagulation
GO:0008150 ND biological_process
GO:0016020 IDA membrane
GO:0016529 IEA sarcoplasmic reticulum
GO:0030168 TAS platelet activation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045676 calua calumenin a protein_coding Danio_rerio
ENSMUSG00000029767 Calu calumenin protein_coding Mus_musculus

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