C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pseudouridylate synthase 7 homolog (S. cerevisiae)-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000129317 PUS7L 9606 - 12:43728607-43758817 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000344862 PUS7L-001 43728612-43758817 protein_coding
  ENST00000416848 PUS7L-004 43728607-43758758 protein_coding
  ENST00000431332 PUS7L-005 43729763-43758793 protein_coding
  ENST00000547156 PUS7L-009 43738353-43758759 protein_coding
  ENST00000549868 PUS7L-007 43754867-43758759 protein_coding
  ENST00000550784 PUS7L-008 43738333-43758759 protein_coding
  ENST00000551923 PUS7L-002 43729258-43758773 protein_coding
  ENST00000553166 PUS7L-006 43746214-43758767 non_stop_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000344862ENST00000416848ENST00000431332ENST00000549868ENST00000550784ENST00000551923
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000344862 0.214±0.00 N/A 1.083±0.00 1.811±0.00 2.785±2.51 1.026±0.58 0.696±0.00 0.642±0.00 0.995±0.88 N/A N/A 3.433±0.00 N/A N/A
ENST00000416848 N/A 0.159±0.00 N/A 0.458±0.00 N/A N/A N/A N/A N/A N/A N/A 0.423±0.00 0.165±0.05 0.416±0.00
ENST00000431332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.230±0.08 N/A N/A N/A
ENST00000549868 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.947±0.00 1.156±0.00 N/A N/A N/A
ENST00000550784 N/A N/A 2.283±0.00 N/A N/A N/A N/A N/A N/A N/A 0.370±0.00 N/A N/A N/A
ENST00000551923 0.371±0.00 N/A N/A N/A N/A N/A 0.355±0.00 N/A N/A 0.039±0.00 N/A N/A N/A 0.218±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006R3 CIL_0006R3_0001 CGP 12:43353866-43758817
CIL_0006R6 CIL_0006R6_0001 CGP 12:43728607-43789543

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001522 IEA pseudouridine synthesis
GO:0003723 IEA RNA binding
GO:0008033 IEA tRNA processing
GO:0009451 IEA RNA modification
GO:0009982 IEA pseudouridine synthase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069780 pus7l pseudouridylate synthase 7 homolog (S. cerevisiae)-like protein_coding Danio_rerio
ENSMUSG00000033356 Pus7l pseudouridylate synthase 7 homolog (S. cerevisiae)-like protein_coding Mus_musculus

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