C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pseudouridylate synthase 7 homolog (S. cerevisiae)-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000416848 PUS7L-004 ENSG00000129317 9606 - 12:43728607-43758758 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainOvaryPlacentaTestisENST00000416848
Transcript ID Adrenal Brain Ovary Placenta Testis
ENST00000416848 0.159±0.00 0.458±0.00 0.423±0.00 0.165±0.05 0.416±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006R3 CIL_0006R3_0001 CGP 12:43353866-43758817
CIL_0006R6 CIL_0006R6_0001 CGP 12:43728607-43789543

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001522 IEA pseudouridine synthesis
GO:0003723 IEA RNA binding
GO:0008033 IEA tRNA processing
GO:0009451 IEA RNA modification
GO:0009982 IEA pseudouridine synthase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049151 Pus7l-001 protein_coding Mus_musculus 0 1197
ENSMUST00000147832 Pus7l-002 retained_intron Mus_musculus 0 538

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