C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pseudouridylate synthase 7 homolog (S. cerevisiae)-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000344862 PUS7L-001 ENSG00000129317 9606 - 12:43728612-43758817 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverOvaryENST00000344862
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Ovary
ENST00000344862 0.214±0.00 1.083±0.00 1.811±0.00 2.785±2.51 1.026±0.58 0.696±0.00 0.642±0.00 0.995±0.88 3.433±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006R3 CIL_0006R3_0001 CGP 12:43353866-43758817
CIL_0006R6 CIL_0006R6_0001 CGP 12:43728607-43789543

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001522 IEA pseudouridine synthesis
GO:0003723 IEA RNA binding
GO:0008033 IEA tRNA processing
GO:0009451 IEA RNA modification
GO:0009982 IEA pseudouridine synthase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049151 Pus7l-001 protein_coding Mus_musculus 0 1199
ENSMUST00000147832 Pus7l-002 retained_intron Mus_musculus 0 538

Loading