C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pseudouridylate synthase 7 homolog (S. cerevisiae)-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000550784 PUS7L-008 ENSG00000129317 9606 - 12:43738333-43758759 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderMuscleENST00000550784
Transcript ID Bladder Muscle
ENST00000550784 2.283±0.00 0.370±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006R3 CIL_0006R3_0001 CGP 12:43353866-43758817
CIL_0006R6 CIL_0006R6_0001 CGP 12:43728607-43789543

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001522 IEA pseudouridine synthesis
GO:0003723 IEA RNA binding
GO:0009451 IEA RNA modification
GO:0009982 IEA pseudouridine synthase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049151 Pus7l-001 protein_coding Mus_musculus 0 560
ENSMUST00000147832 Pus7l-002 retained_intron Mus_musculus 0 204

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