C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NOP2/Sun domain family, member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130305 NSUN5 9606 - 7:73302517-73308867 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000252594 NSUN5-002 73303230-73308806 protein_coding
  ENST00000310326 NSUN5-004 73303235-73308816 protein_coding
  ENST00000428206 NSUN5-005 73302517-73308804 protein_coding
  ENST00000438747 NSUN5-001 73303230-73308867 protein_coding
  ENST00000455763 NSUN5-006 73304316-73308553 nonsense_mediated_decay
  ENST00000471461 NSUN5-003 73303225-73308816 retained_intron
  ENST00000478977 NSUN5-007 73303931-73304703 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000252594ENST00000310326ENST00000438747ENST00000455763ENST00000471461ENST00000478977
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000252594 N/A N/A 0.451±0.00 0.374±0.00 1.225±0.36 0.324±0.00 1.188±0.00 N/A 0.595±0.00 2.401±0.00 4.558±2.69 N/A 2.214±0.00
ENST00000310326 4.714±0.00 7.541±0.00 4.394±0.00 5.795±0.00 3.424±0.00 0.629±0.00 3.391±0.00 0.371±0.14 N/A 2.698±0.00 4.066±0.00 1.720±0.10 4.858±0.00
ENST00000438747 4.781±0.00 N/A 2.561±0.11 1.812±0.00 2.155±0.00 1.116±0.50 2.071±0.00 2.145±0.00 1.946±0.67 8.335±0.00 11.679±7.33 9.593±1.30 8.140±2.43
ENST00000455763 N/A N/A N/A N/A N/A N/A N/A N/A 0.907±0.00 N/A N/A N/A N/A
ENST00000471461 N/A 3.411±0.00 0.608±0.00 0.794±0.00 N/A 0.178±0.00 0.559±0.00 0.408±0.00 0.295±0.00 N/A 4.217±3.70 N/A 1.888±0.00
ENST00000478977 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.367±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UT CIL_0005UT_0001 CGP 7:72959485-73308867

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0006364 IEA rRNA processing
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043209 nsun5 NOP2/Sun domain family, member 5 protein_coding Danio_rerio
ENSMUSG00000000916 Nsun5 NOL1/NOP2/Sun domain family, member 5 protein_coding Mus_musculus

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