C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NOP2/Sun domain family, member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000310326 NSUN5-004 ENSG00000130305 9606 - 7:73303235-73308816 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000310326
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000310326 4.714±0.00 7.541±0.00 4.394±0.00 5.795±0.00 3.424±0.00 0.629±0.00 3.391±0.00 0.371±0.14 2.698±0.00 4.066±0.00 1.720±0.10 4.858±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UT CIL_0005UT_0001 CGP 7:72959485-73308867

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0006364 IEA rRNA processing
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000940 Nsun5-001 protein_coding Mus_musculus 0 1238
ENSMUST00000141867 Nsun5-004 retained_intron Mus_musculus 0 451
ENSMUST00000126454 Nsun5-005 retained_intron Mus_musculus 0 342

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