C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tubby like protein 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130338 TULP4 9606 + 6:158232236-158511828 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000367094 TULP4-002 158312660-158508376 protein_coding
  ENST00000367097 TULP4-001 158312488-158511828 protein_coding
  ENST00000432358 TULP4-005 158282263-158312358 processed_transcript
  ENST00000613390 TULP4-004 158461650-158498693 nonsense_mediated_decay
  ENST00000613994 TULP4-007 158310364-158312363 processed_transcript
  ENST00000616856 TULP4-003 158313445-158481538 retained_intron
  ENST00000620026 TULP4-006 158232236-158312662 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000367094ENST00000367097
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000367094 N/A N/A N/A N/A N/A N/A N/A N/A 0.774±0.00 N/A N/A N/A
ENST00000367097 1.303±0.00 5.731±0.47 1.667±0.00 0.865±0.20 0.571±0.11 1.261±0.00 1.369±0.99 1.144±0.00 1.321±0.55 2.608±1.28 0.274±0.11 0.868±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004W3 CIL_0004W3_0001 CGP 6:158168352-158511828
CIL_0002QL CIL_0002QL_0002 CGP 6:158232236-158635428

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003700 NAS sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0007584 TAS response to nutrient
GO:0016567 IEA protein ubiquitination
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045911 tulp4a tubby like protein 4a protein_coding Danio_rerio
ENSDARG00000063056 tulp4b tubby like protein 4b protein_coding Danio_rerio
ENSMUSG00000034377 Tulp4 tubby like protein 4 protein_coding Mus_musculus

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