C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubby like protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367097 TULP4-001 ENSG00000130338 9606 + 6:158312488-158511828 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000367097
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000367097 1.303±0.00 5.731±0.47 1.667±0.00 0.865±0.20 0.571±0.11 1.261±0.00 1.369±0.99 1.144±0.00 1.321±0.55 2.608±1.28 0.274±0.11 0.868±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004W3 CIL_0004W3_0001 CGP 6:158168352-158511828
CIL_0002QL CIL_0002QL_0002 CGP 6:158232236-158635428

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 NAS sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0007584 TAS response to nutrient
GO:0016567 IEA protein ubiquitination
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000039655 Tulp4-001 protein_coding Mus_musculus 0 5782
ENSMUST00000149756 Tulp4-002 protein_coding Mus_musculus 0 5025
ENSMUST00000141059 Tulp4-007 retained_intron Mus_musculus 0 2745
ENSMUST00000137063 Tulp4-008 protein_coding Mus_musculus 0 1731
ENSDART00000091818 tulp4b-201 protein_coding Danio_rerio 0 1086
ENSDART00000067486 tulp4a-201 protein_coding Danio_rerio 0 1055
ENSDART00000132625 tulp4a-001 protein_coding Danio_rerio 0 793
ENSMUST00000142030 Tulp4-010 protein_coding Mus_musculus 0 774
ENSDART00000155957 tulp4b-001 protein_coding Danio_rerio 0 532

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