C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SCO2 cytochrome c oxidase assembly protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000543927 SCO2-202 ENSG00000130489 9606 - 22:50523568-50526439 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000V1 CIL_0000V1_0002 CGP 22:50508216-50526439
CIL_00025U CIL_00025U_0001 CGP 22:50523568-50530085

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001654 IMP eye development
GO:0001701 IEA in utero embryonic development
GO:0003012 IEA muscle system process
GO:0005507 NAS:IEA copper ion binding
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006825 IEA copper ion transport
GO:0006878 IEA cellular copper ion homeostasis
GO:0008535 IEA respiratory chain complex IV assembly
GO:0014823 IEA response to activity
GO:0022904 IEA respiratory electron transport chain
GO:0030016 IDA myofibril
GO:0055070 IEA copper ion homeostasis
GO:0055114 TAS oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000145259 Ncaph2-003 nonsense_mediated_decay Mus_musculus 0 604
ENSMUST00000088717 Ncaph2-002 protein_coding Mus_musculus 0 604
ENSMUST00000074552 Ncaph2-001 protein_coding Mus_musculus 0 604
ENSMUST00000036987 Ncaph2-004 protein_coding Mus_musculus 0 604
ENSMUST00000167643 Sco2-201 protein_coding Mus_musculus 0 604
ENSMUST00000023285 Tymp-201 protein_coding Mus_musculus 0 372

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