C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: synaptotagmin XI
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000132718 SYT11 9606 + 1:155859509-155885199 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000368324 SYT11-001 155859509-155885199 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000368324
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000368324 4.388±0.00 4.756±0.00 1.376±0.00 114.333±41.10 3.437±0.32 5.592±4.26 2.745±1.27 1.752±1.64 2.134±1.74 3.036±1.27 0.937±0.33 5.377±3.20 4.365±1.23 4.525±1.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000898 CIL_000898_0001 VISTA 1:155789635-156392759
CIL_0008P5 CIL_0008P5_0001 VISTA 1:155795688-156399252
CIL_0000CZ CIL_0000CZ_0002 CGP 1:155859509-155911404

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005509 ISS calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005544 ISS calcium-dependent phospholipid binding
GO:0005887 IEA integral component of plasma membrane
GO:0006810 IEA transport
GO:0008021 TAS synaptic vesicle
GO:0030054 IEA cell junction
GO:0046929 TAS negative regulation of neurotransmitter secretion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056105 syt11b synaptotagmin XIb protein_coding Danio_rerio
ENSDARG00000057913 syt11a synaptotagmin XIa protein_coding Danio_rerio
ENSMUSG00000068923 Syt11 synaptotagmin XI protein_coding Mus_musculus

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