C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000CZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000057913-ENSDARG00000069150 CGP 7955 19:24468131-24552368
GeneTranscriptPositionBiotype
ENSDARG00000057913 (syt11a)
synaptotagmin XIa 		ENSDART00000080673 (syt11a-001) 24468131-24520375 protein_coding
ENSDARG00000069150 (rit1)
Ras-like without CAAX 1 		ENSDART00000100422 (rit1-001) 24525495-24551187 protein_coding
ENSDART00000126492 (rit1-201) 24528721-24552368 protein_coding
ENSDART00000144541 (rit1-002) 24525513-24532931 retained_intron
CIL_0000CZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000132718-ENSG00000143622 CGP 9606 1:155859509-155911404
GeneTranscriptPositionBiotype
ENSG00000132718 (SYT11)
synaptotagmin XI 		ENST00000368324 (SYT11-001) 155859509-155885199 protein_coding
ENSG00000143622 (RIT1)
Ras-like without CAAX 1 		ENST00000368322 (RIT1-002) 155900274-155910915 protein_coding
ENST00000368323 (RIT1-001) 155897808-155911404 protein_coding
ENST00000461050 (RIT1-003) 155900398-155911344 nonsense_mediated_decay
ENST00000462687 (RIT1-004) 155910095-155910791 retained_intron
ENST00000539040 (RIT1-005) 155900183-155911402 protein_coding
ENST00000609492 (RIT1-006) 155900594-155910881 protein_coding
ENSG00000201614 (RNU4-19P)
RNA, U4 small nuclear 19, pseudogene 		ENST00000364744 (RNU4-19P-201) 155894281-155894386 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000CZ_0001ENSDARG00000057913ENSDART00000080673ENSDARG00000069150ENSDART00000100422ENSDART00000126492ENSDART00000144541CIL_0000CZ_0002ENSG00000132718ENST00000368324ENSG00000143622ENST00000368322ENST00000368323ENST00000461050ENST00000462687ENST00000539040ENST00000609492ENSG00000201614ENST00000364744
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000CZ_0001ENSDARG00000057913ENSDART00000080673ENSDARG00000069150ENSDART00000100422ENSDART00000126492ENSDART00000144541CIL_0000CZ_0002ENSG00000132718ENST00000368324ENSG00000143622ENST00000368322ENST00000368323ENST00000461050ENST00000539040ENST00000609492ENSG00000201614ENST00000364744
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000057913 ENSDART00000080673 N/A N/A N/A 155.146±42.79 N/A N/A 1.353±0.75 2.694±1.08 0.133±0.00 N/A 7.750±0.00 N/A N/A N/A
ENSDARG00000069150 ENSDART00000100422 N/A N/A N/A 7.364±1.02 N/A N/A 4.291±1.52 1.751±0.00 0.081±0.00 N/A N/A N/A N/A N/A
ENSDART00000126492 N/A N/A N/A 6.134±2.20 N/A N/A 4.987±0.77 2.986±0.07 N/A N/A N/A N/A N/A N/A
ENSDART00000144541 N/A N/A N/A N/A N/A N/A N/A N/A 0.155±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132718 ENST00000368324 4.388±0.00 4.756±0.00 1.376±0.00 114.333±41.10 3.437±0.32 5.592±4.26 2.745±1.27 1.752±1.64 2.134±1.74 3.036±1.27 0.937±0.33 5.377±3.20 4.365±1.23 4.525±1.85
ENSG00000143622 ENST00000368322 N/A N/A N/A N/A N/A 5.101±0.00 3.028±0.00 6.378±0.00 1.311±0.00 9.083±0.00 N/A N/A 3.723±0.85 N/A
ENST00000368323 8.172±0.00 1.017±0.00 3.089±0.00 2.292±1.13 3.124±1.02 3.001±0.30 1.021±0.11 3.429±1.15 1.144±0.51 7.612±0.93 1.800±0.00 7.525±4.42 3.368±1.86 6.319±0.31
ENST00000461050 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.808±0.00 N/A
ENST00000462687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539040 N/A N/A N/A 2.877±0.00 3.296±0.00 N/A 1.356±0.00 N/A N/A N/A 2.067±0.00 9.018±0.00 3.009±0.00 N/A
ENST00000609492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.115±0.00 N/A N/A N/A
ENSG00000201614 ENST00000364744 0.526±0.00 N/A N/A 0.673±0.00 N/A N/A N/A N/A N/A N/A N/A 2.242±0.00 N/A 0.462±0.00

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