C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, MYM-type 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000132950 ZMYM5 9606 - 13:19823482-19863636 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000337963 ZMYM5-201 19823484-19863636 protein_coding
  ENST00000382905 ZMYM5-003 19837465-19863524 protein_coding
  ENST00000382907 ZMYM5-001 19837453-19863508 protein_coding
  ENST00000382909 ZMYM5-002 19823482-19851796 retained_intron
  ENST00000467542 ZMYM5-004 19837465-19863524 retained_intron
  ENST00000495534 ZMYM5-005 19837465-19863524 retained_intron
  ENST00000502168 ZMYM5-006 19823853-19852150 protein_coding
  ENST00000535942 ZMYM5-007 19823482-19863612 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000337963ENST00000382905ENST00000382907ENST00000382909ENST00000467542ENST00000495534ENST00000502168ENST00000535942
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000337963 0.706±0.00 1.460±0.00 N/A N/A 0.514±0.00 0.480±0.00 1.091±0.00 0.619±0.00 0.521±0.00 N/A 0.402±0.00 2.563±0.11 0.480±0.09 2.228±0.00
ENST00000382905 0.438±0.00 N/A N/A 0.471±0.00 1.129±0.00 N/A N/A N/A 0.572±0.00 1.304±0.00 N/A 2.085±0.00 0.533±0.00 2.565±0.00
ENST00000382907 N/A N/A N/A N/A N/A N/A N/A 0.458±0.00 N/A N/A N/A 9.486±0.00 1.887±1.32 19.719±0.00
ENST00000382909 0.226±0.00 N/A 0.102±0.00 N/A N/A N/A N/A N/A 0.484±0.00 0.988±0.00 N/A 1.221±0.00 N/A 0.689±0.00
ENST00000467542 N/A 1.240±0.00 N/A 0.553±0.16 0.856±0.00 1.436±0.00 0.796±0.40 N/A 0.574±0.00 N/A N/A 1.041±0.00 N/A N/A
ENST00000495534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.160±0.00 N/A 0.566±0.00 N/A
ENST00000502168 0.580±0.00 0.973±0.00 0.170±0.00 1.006±0.12 0.852±0.21 0.904±0.16 0.466±0.03 0.963±0.06 0.493±0.10 1.290±0.14 1.053±0.00 1.374±0.13 0.301±0.08 3.230±0.74
ENST00000535942 N/A N/A N/A N/A 0.288±0.00 0.386±0.00 N/A N/A N/A N/A 0.279±0.00 0.691±0.00 N/A 1.806±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000432 CIL_000432_0001 CGP 13:19674752-19863636
CIL_0003SJ CIL_0003SJ_0001 CGP 13:19823482-20091829

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027353 zmym2 zinc finger, MYM-type 2 protein_coding Danio_rerio
ENSMUSG00000040123 Zmym5 zinc finger, MYM-type 5 protein_coding Mus_musculus

Loading