C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, MYM-type 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040123 Zmym5 10090 - 14:56790585-56811716 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000039812 Zmym5-201 56790585-56811716 protein_coding
  ENSMUST00000111285 Zmym5-202 56790588-56811716 protein_coding
  ENSMUST00000173954 Zmym5-001 56792929-56811464 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039812ENSMUST00000111285ENSMUST00000173954
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039812 N/A 1.498±0.80 N/A N/A 1.303±0.00 0.658±0.09 N/A N/A 0.402±0.07 1.088±0.00 N/A 1.766±0.68 N/A N/A
ENSMUST00000111285 N/A 1.534±0.78 1.591±0.00 1.152±0.11 2.549±0.00 1.472±1.06 0.377±0.04 0.745±0.00 0.667±0.17 0.745±0.00 N/A 1.716±1.20 1.030±0.53 0.430±0.07
ENSMUST00000173954 1.044±0.00 2.046±0.76 11.462±0.02 4.227±0.90 1.789±0.72 1.990±0.42 1.217±0.18 2.853±0.00 2.703±1.45 2.459±0.32 3.194±0.48 5.746±2.71 8.025±2.08 3.230±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000432 CIL_000432_0002 CGP 14:56722441-56811716
CIL_0003SJ CIL_0003SJ_0002 CGP 14:56790585-56962579

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027353 zmym2 zinc finger, MYM-type 2 protein_coding Danio_rerio
ENSG00000132950 ZMYM5 zinc finger, MYM-type 5 protein_coding Homo_sapiens

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