C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, MYM-type 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000382909 ZMYM5-002 ENSG00000132950 9606 - 13:19823482-19851796 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderLiverLungOvaryTestisENST00000382909
Transcript ID Adipose Bladder Liver Lung Ovary Testis
ENST00000382909 0.226±0.00 0.102±0.00 0.484±0.00 0.988±0.00 1.221±0.00 0.689±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000432 CIL_000432_0001 CGP 13:19674752-19863636
CIL_0003SJ CIL_0003SJ_0001 CGP 13:19823482-20091829

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000039812 Zmym5-201 protein_coding Mus_musculus 0 1068
ENSMUST00000111285 Zmym5-202 protein_coding Mus_musculus 0 1068
ENSMUST00000173954 Zmym5-001 protein_coding Mus_musculus 0 1068
ENSMUST00000124359 Gm2869-001 processed_pseudogene Mus_musculus 0 950
ENSMUST00000118676 Gm15303-001 processed_pseudogene Mus_musculus 0 911
ENSMUST00000122150 Gm15304-001 processed_pseudogene Mus_musculus 0 905
ENSMUST00000121457 Gm7869-001 processed_pseudogene Mus_musculus 0 904
ENSMUST00000117779 Gm15302-001 processed_pseudogene Mus_musculus 0 893
ENSMUST00000022511 Zmym2-201 protein_coding Mus_musculus 0 784
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0000000005 71

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