C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, MYM-type 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000502168 ZMYM5-006 ENSG00000132950 9606 - 13:19823853-19852150 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000502168
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000502168 0.580±0.00 0.973±0.00 0.170±0.00 1.006±0.12 0.852±0.21 0.904±0.16 0.466±0.03 0.963±0.06 0.493±0.10 1.290±0.14 1.053±0.00 1.374±0.13 0.301±0.08 3.230±0.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000432 CIL_000432_0001 CGP 13:19674752-19863636
CIL_0003SJ CIL_0003SJ_0001 CGP 13:19823482-20091829

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000039812 Zmym5-201 protein_coding Mus_musculus 0 1299
ENSMUST00000111285 Zmym5-202 protein_coding Mus_musculus 0 1299
ENSMUST00000173954 Zmym5-001 protein_coding Mus_musculus 0 1299
ENSMUST00000124359 Gm2869-001 processed_pseudogene Mus_musculus 0 1153
ENSMUST00000121457 Gm7869-001 processed_pseudogene Mus_musculus 0 1120
ENSMUST00000118676 Gm15303-001 processed_pseudogene Mus_musculus 0 1120
ENSMUST00000122150 Gm15304-001 processed_pseudogene Mus_musculus 0 1103
ENSMUST00000117779 Gm15302-001 processed_pseudogene Mus_musculus 0 1101
ENSMUST00000022511 Zmym2-201 protein_coding Mus_musculus 0 599
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0000000005 71

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