C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine rich repeat and coiled-coil centrosomal protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000133739 LRRCC1 9606 + 8:85107147-85146076 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000360375 LRRCC1-001 85107147-85146076 protein_coding
  ENST00000414626 LRRCC1-006 85108662-85146076 protein_coding
  ENST00000517875 LRRCC1-002 85107238-85138074 nonsense_mediated_decay
  ENST00000522567 LRRCC1-005 85107215-85138174 nonsense_mediated_decay
  ENST00000522770 LRRCC1-003 85107238-85138170 nonsense_mediated_decay
  ENST00000523669 LRRCC1-004 85107238-85131930 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000360375ENST00000414626ENST00000517875ENST00000522567ENST00000522770
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000360375 0.201±0.00 0.346±0.00 N/A 0.254±0.06 0.272±0.05 N/A 0.182±0.00 0.249±0.00 N/A N/A 1.263±0.92 0.368±0.00 7.494±4.60
ENST00000414626 N/A N/A N/A 0.169±0.00 0.756±0.00 N/A 0.041±0.00 0.155±0.00 N/A N/A 0.099±0.00 N/A N/A
ENST00000517875 N/A N/A 0.601±0.00 0.928±0.00 N/A N/A 0.276±0.12 0.787±0.00 N/A 0.074±0.00 N/A N/A N/A
ENST00000522567 N/A N/A N/A N/A N/A N/A N/A N/A 0.897±0.00 0.113±0.00 0.777±0.00 N/A N/A
ENST00000522770 N/A N/A N/A 0.364±0.00 N/A 1.788±0.00 0.175±0.00 N/A N/A 0.083±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071V CIL_00071V_0001 CGP 8:85107147-85217158

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005813 IDA centrosome
GO:0007067 IEA mitotic nuclear division

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078535 lrrcc1 leucine rich repeat and coiled-coil domain containing 1 protein_coding Danio_rerio
ENSMUSG00000027550 Lrrcc1 leucine rich repeat and coiled-coil domain containing 1 protein_coding Mus_musculus

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