C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat and coiled-coil centrosomal protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000360375 LRRCC1-001 ENSG00000133739 9606 + 8:85107147-85146076 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartLiverOvaryPlacentaTestisENST00000360375
Transcript ID Adipose Adrenal Brain Breast Heart Liver Ovary Placenta Testis
ENST00000360375 0.201±0.00 0.346±0.00 0.254±0.06 0.272±0.05 0.182±0.00 0.249±0.00 1.263±0.92 0.368±0.00 7.494±4.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071V CIL_00071V_0001 CGP 8:85107147-85217158

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005813 IDA centrosome
GO:0007067 IEA mitotic nuclear division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169079 Lrrcc1-001 protein_coding Mus_musculus 0 3013
ENSMUST00000108370 Lrrcc1-004 protein_coding Mus_musculus 0 2747
ENSMUST00000091325 Lrrcc1-002 protein_coding Mus_musculus 0 2163
ENSMUST00000163660 Lrrcc1-006 protein_coding Mus_musculus 0 2021
ENSMUST00000167858 Lrrcc1-003 protein_coding Mus_musculus 0 1598
ENSMUST00000165436 Lrrcc1-005 nonsense_mediated_decay Mus_musculus 0 832
ENSMUST00000169799 Lrrcc1-007 protein_coding Mus_musculus 0 412

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