C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat and coiled-coil centrosomal protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000517875 LRRCC1-002 ENSG00000133739 9606 + 8:85107238-85138074 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartLiverMuscleENST00000517875
Transcript ID Bladder Brain Heart Liver Muscle
ENST00000517875 0.601±0.00 0.928±0.00 0.276±0.12 0.787±0.00 0.074±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071V CIL_00071V_0001 CGP 8:85107147-85217158

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163660 Lrrcc1-006 protein_coding Mus_musculus 0 2087
ENSMUST00000169079 Lrrcc1-001 protein_coding Mus_musculus 0 2021
ENSMUST00000108370 Lrrcc1-004 protein_coding Mus_musculus 0 2021
ENSMUST00000091325 Lrrcc1-002 protein_coding Mus_musculus 0 1476
ENSMUST00000167858 Lrrcc1-003 protein_coding Mus_musculus 0 1164
ENSMUST00000165436 Lrrcc1-005 nonsense_mediated_decay Mus_musculus 0 832
ENSMUST00000169799 Lrrcc1-007 protein_coding Mus_musculus 0 412

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