C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: potassium channel tetramerization domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000134504 KCTD1 9606 - 18:26454910-26657401 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000317932 KCTD1-201 26454913-26629242 protein_coding
  ENST00000408011 KCTD1-003 26454974-26549435 protein_coding
  ENST00000417602 KCTD1-202 26454913-26549814 protein_coding
  ENST00000577255 KCTD1-004 26455713-26476891 retained_intron
  ENST00000578973 KCTD1-006 26459789-26546999 protein_coding
  ENST00000579973 KCTD1-001 26454910-26640344 protein_coding
  ENST00000580059 KCTD1-005 26455498-26547118 protein_coding
  ENST00000580191 KCTD1-009 26455760-26657401 protein_coding
  ENST00000580638 KCTD1-002 26455892-26549819 protein_coding
  ENST00000582494 KCTD1-007 26455770-26460876 processed_transcript
  ENST00000584630 KCTD1-008 26581162-26657394 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000408011ENST00000417602ENST00000577255ENST00000578973ENST00000580059ENST00000580191ENST00000580638ENST00000582494
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000408011 0.887±0.00 0.319±0.00 1.119±0.00 N/A 0.914±0.00 0.888±0.61 0.774±0.00 7.610±0.00 0.305±0.00 1.134±0.00 0.642±0.00 1.036±0.00 3.813±1.00 0.503±0.00
ENST00000417602 N/A N/A N/A 6.977±0.00 N/A N/A 0.864±0.00 N/A N/A 0.257±0.00 N/A 0.914±0.00 N/A 0.261±0.00
ENST00000577255 N/A N/A 0.292±0.00 N/A 0.239±0.00 0.251±0.00 N/A N/A 0.376±0.00 N/A N/A 0.095±0.00 N/A 0.129±0.00
ENST00000578973 N/A N/A N/A N/A 1.979±0.00 N/A 0.733±0.00 0.764±0.00 N/A N/A N/A 2.902±1.48 11.522±0.00 1.781±0.00
ENST00000580059 0.977±0.00 N/A 3.534±0.00 7.689±0.00 N/A N/A 1.105±0.00 N/A N/A 0.918±0.00 N/A 4.219±0.94 4.013±0.00 0.419±0.00
ENST00000580191 N/A N/A N/A N/A 2.103±0.00 N/A 0.575±0.00 N/A 0.282±0.00 1.127±0.00 0.702±0.00 N/A 6.918±0.00 3.175±0.00
ENST00000580638 N/A N/A N/A N/A N/A N/A N/A 1.303±0.00 N/A N/A 0.581±0.00 1.330±0.64 N/A 0.813±0.00
ENST00000582494 N/A N/A N/A 17.246±0.00 N/A 3.909±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LU CIL_0007LU_0001 UCNEbase 18:24628254-26687255
CIL_0006ER CIL_0006ER_0001 CGP 18:26225936-26657401
CIL_0006EQ CIL_0006EQ_0001 CGP 18:26454910-26865818

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003714 IDA transcription corepressor activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0008134 IPI transcription factor binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0051260 IEA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074056 kctd1 potassium channel tetramerisation domain containing 1 protein_coding Danio_rerio
ENSMUSG00000036225 Kctd1 potassium channel tetramerisation domain containing 1 protein_coding Mus_musculus

Loading