C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium channel tetramerization domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000408011 KCTD1-003 ENSG00000134504 9606 - 18:26454974-26549435 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000408011
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000408011 0.887±0.00 0.319±0.00 1.119±0.00 0.914±0.00 0.888±0.61 0.774±0.00 7.610±0.00 0.305±0.00 1.134±0.00 0.642±0.00 1.036±0.00 3.813±1.00 0.503±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LU CIL_0007LU_0001 UCNEbase 18:24628254-26687255
CIL_0006ER CIL_0006ER_0001 CGP 18:26225936-26657401
CIL_0006EQ CIL_0006EQ_0001 CGP 18:26454910-26865818

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003714 IDA transcription corepressor activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0008134 IPI transcription factor binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0051260 IEA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025992 Kctd1-201 protein_coding Mus_musculus 0 1369
ENSMUST00000168989 Kctd1-202 protein_coding Mus_musculus 0 1369

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