C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: desmocollin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000134755 DSC2 9606 - 18:31058840-31102415 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000251081 DSC2-002 31065974-31102004 protein_coding
  ENST00000280904 DSC2-001 31058840-31102415 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000251081ENST00000280904
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000251081 4.882±0.00 1.403±0.00 2.195±0.00 0.711±0.36 7.204±2.41 11.641±9.77 5.032±1.26 3.386±1.19 1.131±0.14 2.818±0.46 0.185±0.02 7.040±5.76 12.297±6.56 0.569±0.23
ENST00000280904 0.395±0.00 N/A 0.149±0.00 0.058±0.00 0.457±0.14 1.369±1.14 N/A 0.230±0.12 0.097±0.00 0.249±0.00 N/A 0.596±0.46 N/A 0.064±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006EN CIL_0006EN_0001 CGP 18:30990008-31102415
CIL_0006EM CIL_0006EM_0001 CGP 18:31058840-31162856

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005886 IEA plasma membrane
GO:0005913 IEA cell-cell adherens junction
GO:0007155 TAS cell adhesion
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0009267 IEA cellular response to starvation
GO:0014704 IDA intercalated disc
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030057 IDA desmosome
GO:0031410 IDA cytoplasmic vesicle
GO:0070062 IDA extracellular vesicular exosome
GO:0086005 IMP ventricular cardiac muscle cell action potential
GO:0086042 IMP cardiac muscle cell-cardiac muscle cell adhesion
GO:0086069 IMP bundle of His cell to Purkinje myocyte communication
GO:0086091 IMP regulation of heart rate by cardiac conduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039677 dsc2l desmocollin 2 like protein_coding Danio_rerio
ENSMUSG00000024331 Dsc2 desmocollin 2 protein_coding Mus_musculus

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