C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006EM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000134755-ENSG00000134765 CGP 9606 18:31058840-31162856
GeneTranscriptPositionBiotype
ENSG00000134755 (DSC2)
desmocollin 2 		ENST00000251081 (DSC2-002) 31065974-31102004 protein_coding
ENST00000280904 (DSC2-001) 31058840-31102415 protein_coding
ENSG00000134765 (DSC1)
desmocollin 1 		ENST00000257197 (DSC1-001) 31129236-31162856 protein_coding
ENST00000257198 (DSC1-002) 31129236-31162856 protein_coding
ENSG00000263698 (RP11-408H20.3)
 ENST00000582307 (RP11-408H20.3-001) 31131456-31132494 antisense
ENSG00000265888 (DSCAS)
DSC1/DSC2 antisense RNA 		ENST00000581836 (DSCAS-001) 31101588-31162789 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0006EM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024331-ENSMUSG00000044322 CGP 10090 18:20030633-20114773
GeneTranscriptPositionBiotype
ENSMUSG00000024331 (Dsc2)
desmocollin 2 		ENSMUST00000039247 (Dsc2-001) 20030633-20059554 protein_coding
ENSMUST00000075214 (Dsc2-002) 20030633-20059478 protein_coding
ENSMUST00000128464 (Dsc2-003) 20031479-20059509 nonsense_mediated_decay
ENSMUST00000155407 (Dsc2-004) 20031343-20038139 protein_coding
ENSMUSG00000044322 (Dsc1)
desmocollin 1 		ENSMUST00000038710 (Dsc1-201) 20084703-20114773 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006EM_0001ENSG00000134755ENST00000251081ENST00000280904ENSG00000134765ENST00000257197ENST00000257198ENSG00000263698ENST00000582307ENSG00000265888ENST00000581836CIL_0006EM_0002ENSMUSG00000024331ENSMUST00000039247ENSMUST00000075214ENSMUST00000128464ENSMUST00000155407ENSMUSG00000044322ENSMUST00000038710
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006EM_0001ENSG00000134755ENST00000251081ENST00000280904ENSG00000134765ENST00000257197ENST00000257198ENSG00000263698ENST00000582307ENSG00000265888ENST00000581836CIL_0006EM_0002ENSMUSG00000024331ENSMUST00000039247ENSMUST00000075214ENSMUST00000128464ENSMUST00000155407ENSMUSG00000044322ENSMUST00000038710
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134755 ENST00000251081 4.882±0.00 1.403±0.00 2.195±0.00 0.711±0.36 7.204±2.41 11.641±9.77 5.032±1.26 3.386±1.19 1.131±0.14 2.818±0.46 0.185±0.02 7.040±5.76 12.297±6.56 0.569±0.23
ENST00000280904 0.395±0.00 N/A 0.149±0.00 0.058±0.00 0.457±0.14 1.369±1.14 N/A 0.230±0.12 0.097±0.00 0.249±0.00 N/A 0.596±0.46 N/A 0.064±0.04
ENSG00000134765 ENST00000257197 N/A N/A 0.327±0.00 N/A N/A N/A N/A 0.162±0.00 N/A N/A 0.016±0.00 0.016±0.00 0.170±0.00 N/A
ENST00000257198 0.271±0.00 0.058±0.00 0.046±0.00 0.093±0.01 0.060±0.04 0.026±0.02 1.338±0.00 0.085±0.03 0.057±0.05 0.013±0.01 N/A 0.035±0.03 0.052±0.01 0.039±0.03
ENSG00000263698 ENST00000582307 N/A N/A N/A 0.054±0.00 N/A 0.382±0.00 N/A 0.112±0.00 N/A N/A N/A 0.045±0.02 N/A 0.058±0.00
ENSG00000265888 ENST00000581836 N/A N/A N/A 0.386±0.00 N/A N/A N/A N/A 0.063±0.00 N/A N/A N/A 0.126±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024331 ENSMUST00000039247 0.431±0.00 N/A 1.619±0.18 0.055±0.03 0.771±0.00 N/A 1.852±0.25 0.454±0.00 0.694±0.22 N/A 0.100±0.04 1.318±0.46 10.748±2.79 N/A
ENSMUST00000075214 1.389±0.24 0.895±0.19 1.116±0.04 0.126±0.07 0.636±0.11 17.676±7.19 4.577±0.92 0.477±0.16 5.179±3.02 2.176±1.29 0.065±0.04 1.776±0.78 11.982±3.82 0.109±0.03
ENSMUST00000128464 0.406±0.51 0.439±0.31 N/A 0.122±0.06 1.347±0.46 5.669±1.37 5.547±0.78 0.152±0.05 2.003±0.85 2.042±1.28 N/A 1.304±0.89 17.947±16.44 0.029±0.01
ENSMUST00000155407 N/A 0.705±0.23 0.692±0.00 0.247±0.00 N/A N/A N/A N/A N/A 2.190±0.00 0.018±0.00 1.426±0.51 N/A N/A
ENSMUSG00000044322 ENSMUST00000038710 N/A N/A 0.004±0.00 0.026±0.00 0.208±0.17 N/A N/A N/A 0.012±0.01 1.554±0.00 0.037±0.01 N/A 0.022±0.02 0.039±0.02

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