C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: desmocollin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000134765 DSC1 9606 - 18:31129236-31162856 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000257197 DSC1-001 31129236-31162856 protein_coding
  ENST00000257198 DSC1-002 31129236-31162856 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000257197ENST00000257198
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000257197 N/A N/A 0.327±0.00 N/A N/A N/A N/A 0.162±0.00 N/A N/A 0.016±0.00 0.016±0.00 0.170±0.00 N/A
ENST00000257198 0.271±0.00 0.058±0.00 0.046±0.00 0.093±0.01 0.060±0.04 0.026±0.02 1.338±0.00 0.085±0.03 0.057±0.05 0.013±0.01 N/A 0.035±0.03 0.052±0.01 0.039±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006EM CIL_0006EM_0001 CGP 18:31058840-31162856
CIL_0002FH CIL_0002FH_0002 CGP 18:31129236-31357029

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0005921 TAS gap junction
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 TAS:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030057 IEA desmosome
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039677 dsc2l desmocollin 2 like protein_coding Danio_rerio
ENSMUSG00000044322 Dsc1 desmocollin 1 protein_coding Mus_musculus

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