C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sorting nexin 14
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000135317 SNX14 9606 - 6:85505496-85594156 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000314673 SNX14-002 85505499-85593895 protein_coding
  ENST00000346348 SNX14-001 85505496-85593913 protein_coding
  ENST00000369627 SNX14-008 85505802-85593850 protein_coding
  ENST00000369635 SNX14-005 85513857-85593785 nonsense_mediated_decay
  ENST00000418862 SNX14-004 85508007-85528351 protein_coding
  ENST00000474645 SNX14-003 85505798-85508457 retained_intron
  ENST00000503491 SNX14-012 85505806-85568483 retained_intron
  ENST00000503608 SNX14-019 85517569-85533680 retained_intron
  ENST00000504191 SNX14-016 85547402-85549758 retained_intron
  ENST00000505648 SNX14-009 85505798-85594156 protein_coding
  ENST00000506182 SNX14-017 85528264-85543787 retained_intron
  ENST00000508658 SNX14-020 85507208-85514613 protein_coding
  ENST00000508980 SNX14-006 85505799-85581846 processed_transcript
  ENST00000509338 SNX14-013 85549789-85593885 protein_coding
  ENST00000513865 SNX14-007 85505793-85593805 protein_coding
  ENST00000513869 SNX14-014 85549824-85593857 nonsense_mediated_decay
  ENST00000514419 SNX14-015 85549801-85593871 protein_coding
  ENST00000514801 SNX14-018 85533675-85537024 retained_intron
  ENST00000515216 SNX14-011 85507968-85589693 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyLungMuscleOvaryTestisENST00000314673ENST00000369627ENST00000369635ENST00000505648
Transcript ID Bladder Brain Heart Kidney Lung Muscle Ovary Testis
ENST00000314673 N/A 6.029±0.62 1.388±0.00 N/A N/A N/A 9.773±0.00 N/A
ENST00000369627 3.293±0.00 N/A N/A 5.719±0.00 N/A N/A 6.378±0.00 12.008±0.00
ENST00000369635 N/A N/A N/A N/A 10.239±0.00 N/A N/A N/A
ENST00000505648 N/A 5.743±0.00 1.788±0.00 N/A N/A 1.002±0.00 N/A 15.811±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007K0 CIL_0007K0_0001 UCNEbase 6:84361462-85614404
CIL_0007TL CIL_0007TL_0001 VISTA 6:84971170-85574346
CIL_0006BN CIL_0006BN_0002 CGP 6:85449584-85594156
CIL_0005XI CIL_0005XI_0001 CGP 6:85505496-85615234

Gene Ontology
GO IDEvidence TypeGO Description
GO:0008277 IEA regulation of G-protein coupled receptor protein signaling pathway
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0035091 IEA phosphatidylinositol binding
GO:0038032 IEA termination of G-protein coupled receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006332 snx14 sorting nexin 14 protein_coding Danio_rerio
ENSMUSG00000032422 Snx14 sorting nexin 14 protein_coding Mus_musculus

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