C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004GE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136052-ENSG00000151131 CGP 9606 12:104802553-105049737
GeneTranscriptPositionBiotype
ENSG00000136010 (ALDH1L2)
aldehyde dehydrogenase 1 family, member L2 		ENST00000258494 (ALDH1L2-001) 105019790-105084577 protein_coding
ENST00000548418 (ALDH1L2-005) 105030070-105031935 protein_coding
ENST00000549335 (ALDH1L2-003) 105019784-105066605 retained_intron
ENST00000552270 (ALDH1L2-002) 105024424-105084458 nonsense_mediated_decay
ENST00000552427 (ALDH1L2-004) 105070520-105084444 retained_intron
ENSG00000136052 (SLC41A2)
solute carrier family 41 (magnesium transporter), member 2 		ENST00000258538 (SLC41A2-001) 104802553-104928655 protein_coding
ENST00000411411 (SLC41A2-009) 104928162-104951528 protein_coding
ENST00000415674 (SLC41A2-008) 104928097-104958293 protein_coding
ENST00000417469 (SLC41A2-004) 104928390-104958698 protein_coding
ENST00000424946 (SLC41A2-007) 104928311-104958293 protein_coding
ENST00000432951 (SLC41A2-006) 104928492-104958288 protein_coding
ENST00000433540 (SLC41A2-005) 104928300-104958319 protein_coding
ENST00000437220 (SLC41A2-002) 104889033-104928202 protein_coding
ENST00000449866 (SLC41A2-003) 104928244-104958744 protein_coding
ENST00000549713 (SLC41A2-010) 104804975-104834179 processed_transcript
ENSG00000151131 (C12orf45)
chromosome 12 open reading frame 45 		ENST00000280749 (C12orf45-002) 104986339-104994720 protein_coding
ENST00000548583 (C12orf45-003) 104994492-105049737 processed_transcript
ENST00000552951 (C12orf45-001) 104986310-104995226 protein_coding
ENST00000622317 (C12orf45-201) 104986337-104994712 protein_coding
ENSG00000257758 (KRT18P20)
keratin 18 pseudogene 20 		ENST00000548986 (KRT18P20-001) 104976749-104978027 processed_pseudogene
CIL_0004GE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034591-ENSMUSG00000020255 CGP 10090 10:83230848-83368835
GeneTranscriptPositionBiotype
ENSMUSG00000020255 (D10Wsu102e)
DNA segment, Chr 10, Wayne State University 102, expressed 		ENSMUST00000020488 (D10Wsu102e-201) 83360221-83368835 protein_coding
ENSMUSG00000034591 (Slc41a2)
solute carrier family 41, member 2 		ENSMUST00000039956 (Slc41a2-001) 83230848-83337882 protein_coding
ENSMUST00000126617 (Slc41a2-002) 83316342-83337440 protein_coding
ENSMUST00000139329 (Slc41a2-005) 83301016-83304375 processed_transcript
ENSMUST00000154730 (Slc41a2-003) 83316572-83335402 protein_coding
ENSMUST00000154926 (Slc41a2-004) 83316215-83322883 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004GE_0001ENSG00000136010ENST00000258494ENST00000548418ENST00000549335ENST00000552270ENST00000552427ENSG00000136052ENST00000258538ENST00000411411ENST00000415674ENST00000417469ENST00000424946ENST00000432951ENST00000433540ENST00000437220ENST00000449866ENST00000549713ENSG00000151131ENST00000280749ENST00000548583ENST00000552951ENST00000622317ENSG00000257758ENST00000548986CIL_0004GE_0002ENSMUSG00000020255ENSMUST00000020488ENSMUSG00000034591ENSMUST00000039956ENSMUST00000126617ENSMUST00000139329ENSMUST00000154730ENSMUST00000154926
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004GE_0001ENSG00000136010ENST00000258494ENST00000549335ENST00000552270ENSG00000136052ENST00000258538ENST00000411411ENSG00000151131ENST00000280749ENST00000552951ENST00000622317ENSG00000257758ENST00000548986CIL_0004GE_0002ENSMUSG00000020255ENSMUST00000020488ENSMUSG00000034591ENSMUST00000039956ENSMUST00000154926
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136010 ENST00000258494 0.850±0.00 1.030±0.00 0.067±0.00 0.548±0.00 0.518±0.15 0.279±0.00 0.362±0.19 0.263±0.00 0.366±0.31 0.318±0.08 0.250±0.11 0.160±0.05 0.141±0.00 0.481±0.00
ENST00000548418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549335 N/A N/A N/A 0.132±0.04 N/A 0.444±0.00 N/A N/A N/A 0.177±0.00 N/A 0.279±0.08 0.210±0.00 0.760±0.50
ENST00000552270 N/A N/A 0.028±0.00 N/A N/A N/A 0.139±0.00 N/A N/A N/A 0.100±0.00 N/A N/A N/A
ENST00000552427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000136052 ENST00000258538 2.456±0.00 N/A N/A 1.746±1.08 2.055±1.05 1.387±0.00 0.313±0.04 9.501±8.18 3.715±1.03 1.219±0.70 0.177±0.00 0.842±0.23 1.096±0.76 1.685±0.45
ENST00000411411 N/A N/A 2.322±0.00 15.058±0.00 9.006±0.00 17.555±0.00 1.326±0.00 52.669±0.00 13.067±0.00 8.125±0.00 0.482±0.00 10.892±0.00 N/A N/A
ENST00000415674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000151131 ENST00000280749 N/A N/A 3.270±0.00 N/A N/A N/A N/A N/A N/A 0.978±0.00 N/A N/A N/A N/A
ENST00000548583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552951 N/A N/A N/A 0.624±0.35 0.506±0.00 N/A 0.418±0.00 N/A 0.903±0.00 0.759±0.00 N/A 1.281±0.00 N/A N/A
ENST00000622317 6.484±0.00 14.614±0.00 0.763±0.00 3.409±0.60 5.228±3.50 5.804±2.79 1.704±0.71 2.213±1.20 4.029±3.18 3.226±2.04 3.264±0.00 12.785±7.45 8.002±0.88 9.040±1.26
ENSG00000257758 ENST00000548986 N/A N/A N/A N/A N/A 0.033±0.00 N/A 0.036±0.00 N/A 0.018±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020255 ENSMUST00000020488 6.788±1.82 5.971±0.80 5.314±0.36 3.908±1.24 6.111±1.22 5.034±0.73 1.886±0.10 6.718±0.39 4.709±1.38 5.391±0.12 1.460±0.23 14.320±2.38 9.237±3.40 3.259±1.21
ENSMUSG00000034591 ENSMUST00000039956 0.923±0.23 0.793±0.13 1.130±0.46 0.894±0.28 0.849±0.00 3.208±0.77 0.233±0.00 1.357±0.46 0.058±0.03 1.329±0.17 0.073±0.01 1.746±0.89 1.218±0.86 2.552±1.07
ENSMUST00000126617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154926 N/A N/A N/A N/A N/A N/A N/A N/A 0.065±0.00 N/A N/A N/A N/A 3.080±0.00

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