C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aldehyde dehydrogenase 1 family, member L2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000552270 ALDH1L2-002 ENSG00000136010 9606 - 12:105024424-105084458 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartMuscleENST00000552270
Transcript ID Bladder Heart Muscle
ENST00000552270 0.028±0.00 0.139±0.00 0.100±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004GE CIL_0004GE_0001 CGP 12:104802553-105049737
CIL_0005RN CIL_0005RN_0001 CGP 12:104986310-105084577
CIL_0004GA CIL_0004GA_0001 CGP 12:105019784-105169134

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0006730 IEA one-carbon metabolic process
GO:0008168 IEA methyltransferase activity
GO:0009058 IEA biosynthetic process
GO:0009258 IEA 10-formyltetrahydrofolate catabolic process
GO:0016155 IEA formyltetrahydrofolate dehydrogenase activity
GO:0016620 IEA oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0016742 IEA hydroxymethyl-, formyl- and related transferase activity
GO:0032259 IEA methylation
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020497 Aldh1l2-001 protein_coding Mus_musculus 0 2427
ENSMUST00000146640 Aldh1l2-002 protein_coding Mus_musculus 0 2359
ENSMUST00000138858 Aldh1l2-003 retained_intron Mus_musculus 0 2313
ENSDART00000102893 aldh1l2-001 protein_coding Danio_rerio 0 809
ENSMUST00000143793 Aldh1l2-005 processed_transcript Mus_musculus 0 416

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