C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PWP1 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136045 PWP1 9606 + 12:107685732-107713167 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000412830 PWP1-001 107685732-107713167 protein_coding
  ENST00000541166 PWP1-005 107686042-107712412 protein_coding
  ENST00000547120 PWP1-007 107692683-107697584 retained_intron
  ENST00000547995 PWP1-006 107685808-107693075 protein_coding
  ENST00000552760 PWP1-003 107685802-107697578 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000412830ENST00000541166ENST00000547995ENST00000552760
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000412830 2.830±0.00 2.270±0.00 2.946±0.00 4.945±0.83 3.628±0.85 1.820±0.23 0.812±0.40 3.049±0.50 2.239±0.80 1.829±0.52 1.759±0.00 6.699±0.59 6.559±2.77 6.635±2.26
ENST00000541166 13.805±0.00 18.558±0.00 N/A 9.106±0.00 15.709±0.00 7.548±4.81 2.023±1.75 5.275±4.22 3.692±2.33 5.040±0.00 3.059±2.76 10.732±2.10 11.007±0.19 22.141±0.00
ENST00000547995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.640±0.00 N/A 13.849±0.00
ENST00000552760 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.863±0.00 1.097±0.00 25.097±0.00 30.541±0.00 38.663±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ME CIL_0001ME_0001 CGP 12:107318413-107713167
CIL_0001MB CIL_0001MB_0001 CGP 12:107685732-107761272

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 TAS nucleus
GO:0005730 IDA nucleolus
GO:0005794 IDA Golgi apparatus
GO:0006351 TAS transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015921 pwp1 PWP1 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000001785 Pwp1 PWP1 homolog (S. cerevisiae) protein_coding Mus_musculus

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