C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PWP1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000552760 PWP1-003 ENSG00000136045 9606 + 12:107685802-107697578 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungMuscleOvaryPlacentaTestisENST00000552760
Transcript ID Lung Muscle Ovary Placenta Testis
ENST00000552760 2.863±0.00 1.097±0.00 25.097±0.00 30.541±0.00 38.663±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ME CIL_0001ME_0001 CGP 12:107318413-107713167
CIL_0001MB CIL_0001MB_0001 CGP 12:107685732-107761272

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 TAS nucleus
GO:0005730 IDA nucleolus
GO:0005794 IDA Golgi apparatus
GO:0006351 TAS transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164562 Pwp1-004 retained_intron Mus_musculus 0 383
ENSMUST00000168509 Pwp1-003 nonsense_mediated_decay Mus_musculus 0 383
ENSMUST00000164053 Pwp1-002 retained_intron Mus_musculus 0 383
ENSMUST00000001836 Pwp1-001 protein_coding Mus_musculus 0 383

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