C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PWP1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000412830 PWP1-001 ENSG00000136045 9606 + 12:107685732-107713167 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000412830
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000412830 2.830±0.00 2.270±0.00 2.946±0.00 4.945±0.83 3.628±0.85 1.820±0.23 0.812±0.40 3.049±0.50 2.239±0.80 1.829±0.52 1.759±0.00 6.699±0.59 6.559±2.77 6.635±2.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ME CIL_0001ME_0001 CGP 12:107318413-107713167
CIL_0001MB CIL_0001MB_0001 CGP 12:107685732-107761272

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 TAS nucleus
GO:0005730 IDA nucleolus
GO:0005794 IDA Golgi apparatus
GO:0006351 TAS transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001836 Pwp1-001 protein_coding Mus_musculus 0 1609
ENSMUST00000164053 Pwp1-002 retained_intron Mus_musculus 0 1114
ENSMUST00000130985 Gm3765-001 processed_pseudogene Mus_musculus 0 1103
ENSMUST00000164562 Pwp1-004 retained_intron Mus_musculus 0 730
ENSMUST00000168509 Pwp1-003 nonsense_mediated_decay Mus_musculus 0 621

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