C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PWP1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000541166 PWP1-005 ENSG00000136045 9606 + 12:107686042-107712412 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000541166
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000541166 13.805±0.00 18.558±0.00 9.106±0.00 15.709±0.00 7.548±4.81 2.023±1.75 5.275±4.22 3.692±2.33 5.040±0.00 3.059±2.76 10.732±2.10 11.007±0.19 22.141±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ME CIL_0001ME_0001 CGP 12:107318413-107713167
CIL_0001MB CIL_0001MB_0001 CGP 12:107685732-107761272

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005730 IDA nucleolus
GO:0005794 IDA Golgi apparatus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001836 Pwp1-001 protein_coding Mus_musculus 0 1502
ENSMUST00000130985 Gm3765-001 processed_pseudogene Mus_musculus 0 1031
ENSMUST00000164053 Pwp1-002 retained_intron Mus_musculus 0 1007
ENSMUST00000164562 Pwp1-004 retained_intron Mus_musculus 0 730
ENSMUST00000168509 Pwp1-003 nonsense_mediated_decay Mus_musculus 0 621

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