C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: villin-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136059 VILL 9606 + 3:37988059-38007188 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000283713 VILL-001 37988059-38007188 protein_coding
  ENST00000383759 VILL-201 37993587-38007185 protein_coding
  ENST00000412008 VILL-009 37998318-38002545 nonsense_mediated_decay
  ENST00000416303 VILL-006 37990726-37995789 protein_coding
  ENST00000460040 VILL-008 37993393-37994005 retained_intron
  ENST00000463080 VILL-010 37999232-38003313 retained_intron
  ENST00000465644 VILL-002 37994153-38007161 protein_coding
  ENST00000484717 VILL-004 37994153-38002480 retained_intron
  ENST00000486616 VILL-005 38000907-38007184 retained_intron
  ENST00000488209 VILL-011 38004064-38006204 retained_intron
  ENST00000492491 VILL-007 37991134-37997187 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000283713ENST00000383759ENST00000412008ENST00000416303ENST00000463080ENST00000465644ENST00000484717ENST00000486616ENST00000488209ENST00000492491
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000283713 N/A N/A N/A N/A 0.413±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000383759 0.605±0.00 0.928±0.00 N/A 0.938±0.00 1.116±0.00 2.922±0.00 N/A N/A 2.050±0.00 N/A 2.599±2.78 1.710±0.58 1.809±0.09
ENST00000412008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.648±0.00 N/A N/A
ENST00000416303 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.708±0.00 N/A N/A N/A
ENST00000463080 N/A N/A N/A N/A N/A N/A N/A 0.946±0.00 N/A N/A N/A N/A N/A
ENST00000465644 0.717±0.00 N/A 0.102±0.00 0.640±0.16 1.720±0.00 2.097±0.00 0.173±0.00 0.353±0.00 1.413±0.00 0.266±0.00 3.854±0.39 2.176±0.05 2.607±0.92
ENST00000484717 N/A N/A 0.072±0.00 0.156±0.00 0.528±0.00 N/A N/A 0.801±0.00 N/A 0.125±0.00 N/A N/A N/A
ENST00000486616 N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A N/A N/A 0.152±0.00 N/A 0.469±0.00
ENST00000488209 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.262±0.00 N/A N/A N/A
ENST00000492491 N/A N/A 0.402±0.00 1.092±0.00 0.718±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CZ CIL_0008CZ_0001 VISTA 3:37464508-38067589
CIL_00099X CIL_00099X_0001 VISTA 3:37469210-38073013
CIL_0005AN CIL_0005AN_0001 CGP 3:37861960-38007188
CIL_0005A4 CIL_0005A4_0001 CGP 3:37988059-38029762

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005200 TAS structural constituent of cytoskeleton
GO:0007010 IEA cytoskeleton organization
GO:0015629 TAS actin cytoskeleton
GO:0051693 IEA actin filament capping

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001909 VILL villin-like protein_coding Danio_rerio
ENSMUSG00000038775 Vill villin-like protein_coding Mus_musculus

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