C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: villin-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038775 Vill 10090 + 9:119052778-119071525 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000051386 Vill-001 119052778-119071519 protein_coding
  ENSMUST00000074734 Vill-002 119052802-119071326 protein_coding
  ENSMUST00000126251 Vill-005 119063454-119071337 protein_coding
  ENSMUST00000131647 Vill-010 119052865-119058426 protein_coding
  ENSMUST00000135872 Vill-009 119052778-119058055 retained_intron
  ENSMUST00000136561 Vill-006 119063458-119066817 protein_coding
  ENSMUST00000141185 Vill-004 119063448-119071326 protein_coding
  ENSMUST00000151638 Vill-008 119063482-119065343 processed_transcript
  ENSMUST00000153454 Vill-003 119052778-119071525 retained_intron
  ENSMUST00000153630 Vill-007 119063455-119070067 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000051386ENSMUST00000074734ENSMUST00000126251ENSMUST00000131647ENSMUST00000136561ENSMUST00000141185ENSMUST00000153454ENSMUST00000153630
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000051386 3.390±0.98 0.158±0.06 6.220±0.12 0.176±0.01 5.941±2.40 2.203±0.31 0.260±0.18 7.890±3.16 0.987±0.78 2.460±0.41 0.097±0.00 3.243±1.54 2.865±1.93 1.075±0.46
ENSMUST00000074734 1.096±0.00 0.137±0.00 N/A N/A 2.777±0.00 0.740±0.05 0.086±0.03 2.830±0.83 0.144±0.02 N/A 0.045±0.00 1.519±0.19 0.585±0.00 0.845±0.28
ENSMUST00000126251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.131±0.07 N/A N/A N/A
ENSMUST00000131647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.193±0.00 N/A N/A N/A
ENSMUST00000136561 4.294±0.00 2.112±0.70 N/A 1.248±0.00 20.556±4.95 5.688±0.38 0.257±0.00 18.408±0.00 5.462±2.53 5.123±0.00 0.150±0.00 8.028±0.81 N/A N/A
ENSMUST00000141185 1.856±0.22 0.482±0.22 N/A 0.498±0.04 N/A 2.231±0.07 N/A 8.020±1.08 1.304±0.93 1.994±0.45 0.099±0.04 2.908±1.06 2.361±0.80 1.188±0.00
ENSMUST00000153454 0.919±0.22 0.085±0.00 2.315±1.15 0.120±0.03 2.858±0.32 0.726±0.17 0.069±0.04 N/A 0.041±0.01 0.590±0.00 0.042±0.02 1.084±0.45 0.822±0.29 0.265±0.00
ENSMUST00000153630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.250±0.11 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CZ CIL_0008CZ_0002 VISTA 9:118558597-119161666
CIL_00099X CIL_00099X_0002 VISTA 9:118563323-119168147
CIL_0005AN CIL_0005AN_0002 CGP 9:118926453-119071525
CIL_0005A4 CIL_0005A4_0002 CGP 9:119052778-119093496

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005575 ND cellular_component
GO:0007010 IEA cytoskeleton organization
GO:0051693 IEA actin filament capping

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001909 VILL villin-like protein_coding Danio_rerio
ENSG00000136059 VILL villin-like protein_coding Homo_sapiens

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