C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: villin-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000486616 VILL-005 ENSG00000136059 9606 + 3:38000907-38007184 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartOvaryTestisENST00000486616
Transcript ID Heart Ovary Testis
ENST00000486616 0.040±0.00 0.152±0.00 0.469±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CZ CIL_0008CZ_0001 VISTA 3:37464508-38067589
CIL_00099X CIL_00099X_0001 VISTA 3:37469210-38073013
CIL_0005AN CIL_0005AN_0001 CGP 3:37861960-38007188
CIL_0005A4 CIL_0005A4_0001 CGP 3:37988059-38029762

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000153454 Vill-003 retained_intron Mus_musculus 0 351
ENSMUST00000141185 Vill-004 protein_coding Mus_musculus 0 350
ENSMUST00000051386 Vill-001 protein_coding Mus_musculus 0 350
ENSMUST00000126251 Vill-005 protein_coding Mus_musculus 0 348
ENSMUST00000153630 Vill-007 nonsense_mediated_decay Mus_musculus 0 339

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