C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: golgin A1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136935 GOLGA1 9606 - 9:124878357-124948492 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000373551 GOLGA1-004 124900141-124911919 retained_intron
  ENST00000373555 GOLGA1-001 124878357-124941099 protein_coding
  ENST00000421514 GOLGA1-005 124928249-124948013 protein_coding
  ENST00000475407 GOLGA1-003 124878378-124929268 nonsense_mediated_decay
  ENST00000485337 GOLGA1-002 124889179-124921781 nonsense_mediated_decay
  ENST00000605438 GOLGA1-009 124947607-124948492 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000373555ENST00000421514ENST00000475407ENST00000485337
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000373555 2.587±0.00 4.115±0.00 0.588±0.00 2.762±0.00 2.629±0.54 1.306±0.12 1.487±0.96 2.416±0.19 1.516±0.00 N/A N/A 4.137±1.09 1.523±0.02 12.104±5.02
ENST00000421514 N/A N/A N/A N/A N/A N/A 2.199±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000475407 0.928±0.00 N/A N/A N/A N/A 0.642±0.00 1.147±0.00 1.396±0.00 1.650±0.00 1.058±0.00 1.450±0.00 2.840±0.00 0.608±0.19 N/A
ENST00000485337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.702±0.00 3.519±0.00 21.116±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002C7 CIL_0002C7_0002 CGP 9:124862130-124948492
CIL_00075F CIL_00075F_0001 CGP 9:124878357-125143506

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000042 IEA protein targeting to Golgi
GO:0005515 IEA protein binding
GO:0005794 IDA Golgi apparatus
GO:0005802 IEA trans-Golgi network
GO:0016020 IEA membrane
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0048471 IEA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008979 golga1 golgin A1 protein_coding Danio_rerio
ENSMUSG00000026754 Golga1 golgi autoantigen, golgin subfamily a, 1 protein_coding Mus_musculus

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