C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: golgin A1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475407 GOLGA1-003 ENSG00000136935 9606 - 9:124878378-124929268 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000475407
Transcript ID Adipose Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000475407 0.928±0.00 0.642±0.00 1.147±0.00 1.396±0.00 1.650±0.00 1.058±0.00 1.450±0.00 2.840±0.00 0.608±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002C7 CIL_0002C7_0002 CGP 9:124862130-124948492
CIL_00075F CIL_00075F_0001 CGP 9:124878357-125143506

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000153914 Golga1-006 processed_transcript Mus_musculus 0 1199
ENSMUST00000039165 Golga1-001 protein_coding Mus_musculus 0 773
ENSMUST00000112850 Golga1-003 protein_coding Mus_musculus 0 773
ENSMUST00000136261 Golga1-005 processed_transcript Mus_musculus 0 625
ENSMUST00000126520 Golga1-004 processed_transcript Mus_musculus 0 625
ENSMUST00000184996 Golga1-002 nonsense_mediated_decay Mus_musculus 0 599
ENSMUST00000149842 Golga1-009 processed_transcript Mus_musculus 0 431
ENSMUST00000149810 Golga1-007 processed_transcript Mus_musculus 0 307

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